PO.BCS02.01 · 生物信息与计算

智能体AI赋能的真实世界免疫相关不良事件探索

Agentic AI-enabled exploration of real-world immune-related adverse events

海报缩略图:智能体AI赋能的真实世界免疫相关不良事件探索
编号 32 展板 17 时间 4/19 02:00–05:00 区域 Section 2 主讲 Gabriela Fort, BA
分会场 Agentic AI in Cancer
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作者与单位 Authors & Affiliations

Gabriela Fort1, David Stone1, Ching-Nung Lin1, Arabella Young2, Aik Choon Tan1

1Department of Oncological Sciences, University of Utah, Salt Lake City, UT,2Department of Pathology, University of Utah, Salt Lake City, UT

摘要 Abstract

中文摘要
免疫检查点抑制剂(ICI)已变革了癌症治疗,但其临床获益常因免疫相关不良事件(irAE)的发生而受限,这些不良事件可能严重并导致治疗中断或停药。迫切需要对irAE有更深入的理解,以识别发生不良事件风险最高的患者,并指导irAE预防和风险管理策略。FDA的不良事件报告系统(FAERS)数据库包含超过3200万份提交给FDA以支持药物安全监测的不良事件报告。然而,尽管存在一个用于对FAERS数据进行基本探索的公开仪表板,但提取免疫肿瘤学相关的安全事件或执行对该数据的复杂、多参数查询仍需要大量的技术专长、编程技能以及对底层数据库结构的熟悉。为弥补这一差距并提升这一公共资源的可访问性,我们下载了2012–2025年的所有FAERS报告,并系统性地筛选出接受ICI治疗的癌症病例。我们精心整理了一个高质量、肿瘤学专用的irAE数据集,并生成了一个标准化的平面文件资源,用于下游数据探索和分析。为进一步便于访问并使非编程人员能够轻松探索这些数据,我们开发了一个智能体AI驱动的界面和工作流,允许对数据集进行自然语言查询。我们的系统使用开源大语言模型并配以专门的提示,以对用户意图进行分类并生成可执行的python代码,用于包括筛选、可视化和统计分析在内的复杂分析任务,并实时返回结果。该框架能够跨肿瘤类型、药物类别和其他临床特征交互式、灵活地探索irAE模式。初步分析重现了癌症中已知的irAE关联(例如,与其他irAE相比,接受抗PD-1治疗的患者内分泌和皮肤毒性升高),并揭示了值得进一步研究的潜在肿瘤和治疗特异性irAE特征。总之,该平台为挖掘真实世界免疫治疗安全数据提供了一种透明、可扩展且用户友好的方法,可用于指导生物标志物发现、推动假设生成和/或指导免疫肿瘤学中的irAE风险缓解策略。
查看英文原文 English abstract
Immune checkpoint inhibitors (ICIs) have transformed cancer therapy, but their clinical benefit is often limited by the onset of immune-related adverse events (irAEs), which can be severe and lead to treatment interruption or discontinuation. A deeper understanding of irAEs is urgently needed to identify patients at highest risk of developing adverse events and to guide strategies for irAE prevention and risk management. The FDA's Adverse Event Reporting System (FAERS) database contains over 32 million adverse event reports submitted to the FDA to support drug safety surveillance. However, although a public dashboard exists to perform basic exploration of FAERS data, extracting immuno-oncology-related safety events or executing complex, multiparameter queries of this data still requires substantial technical expertise, programming skills, and a familiarity with the underlying database structure. To address this gap and to enhance the accessibility of this public resource, we downloaded all FAERS reports from 2012-2025 and systematically filtered for cancer cases treated with ICIs. We curated a high-quality, oncology-specific irAE dataset and generated a standardized flat-file resource for downstream data exploration and analysis. To further facilitate access and enable non-programmers to easily explore these data, we developed an agentic AI-driven interface and workflow that allows natural language querying of the dataset. Our system uses open-source large language models with specialized prompting to classify user intent and generate executable python code for complex analytical tasks including filtering, visualization, and statistical analyses, returning results in real time. This framework enables interactive and flexible exploration of irAE patterns across tumor types, drug classes, and other clinical features. Preliminary analyses recapitulate known irAE associations in cancer (e.g. elevated endocrine and cutaneous toxicities compared to other irAEs in anti-PD-1-treated patients) and reveal potential tumor and treatment-specific irAE profiles that warrant further investigation. In summary, this platform provides a transparent, scalable, and user-friendly approach for mining real-world immunotherapy safety data that may be leveraged to inform biomarker discovery, fuel hypothesis generation, and/or guide irAE risk mitigation strategies in immuno-oncology.
利益披露 Disclosure
G. Fort, None.. D. Stone, None.. C. Lin, None.. A. Young, None.. A. Tan, None.

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