PO.PS01.05 · 人群科学

利用自然语言处理挖掘泌尿生殖系统肿瘤患者健康社会决定因素的记录模式

Mining social determinants of health documentation patterns for genitourinary cancer patients using natural language processing

编号 2358 展板 24 时间 4/20 09:00–12:00 区域 Section 36 主讲 Nikita Thakur, MS
分会场 Epidemiology: Cancer Incidence, Mortality, Patterns, and Methodology
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作者与单位 Authors & Affiliations

Nikita Thakur1, Natalie Reizine1, Karine Tawagi1, Charbel Hobeika1, Ashwani Tanwar2, Guanyu Tao2, Marzana Chowdhury2, Evan Garrad3, Ahsan Wahab1, Jingqing Zhang2, Vibhor Gupta4, VK Gadi1, Sandeep Kataria1

1University of Illinois Cancer Center, Chicago, IL,2Pangaea Data, London, United Kingdom,3University of Illinois Chicago, Chicago, IL,4Pangaea Data, South San Francisco, CA

摘要 Abstract

中文摘要
越来越多的证据表明,健康社会决定因素(SDOH)显著影响癌症治疗,导致在预防、诊断、治疗可及性和生存率方面持续存在差异,且这些差异对弱势人群的影响尤为不成比例。然而,SDOH在临床记录中常常被低估记录,掩盖了患者获得适当治疗的障碍。从临床记录中进行系统提取仍具有挑战性。我们开发了一个先进的基于自然语言处理(NLP)的人工智能(AI)平台,用于自动从泌尿生殖系统肿瘤临床记录中提取SDOH。 我们使用该AI平台分析了来自5,585名患者的757,757份临床记录(前列腺癌:n=3,772;膀胱癌:n=619;肾癌:n=1,194,基于ICD编码)。该平台利用NLP在四类记录(病程记录、会诊记录、诊疗计划、患者指导)中提取了19种类型的SDOH特征(如种族、族裔、健康素养、物质滥用、经济压力、社会孤立等)。 该AI平台从4,464名患者(占患者的80%)中提取了767,000条SDOH提及。随机选取了21名患者的140份临床记录以评估AI准确性。在140份记录中,AI在131份记录中发现了SDOH特征,University of Illinois Cancer Center的临床医生人工判定其中124份记录包含完全准确的SDOH提取,7份记录存在部分不准确的SDOH提取,准确率为95%(124/131)。研究显示,健康素养(96.71%)、物质使用(93.15%)以及情绪/情感问题(81.41%)的提及率较高。65%的患者SDOH记录极少(每名患者1.4项特征),35%的患者有多项SDOH记录(每名患者6.9项特征)。 在2018–2023年确诊为泌尿生殖系统肿瘤的2,900名患者中(去除模板化SDOH提及后共317,143条SDOH提及),通过分析COVID-19的影响(2020年3月前后对比),我们发现人口学SDOH的记录减少,例如家庭住址(-37%)、种族(-34%)、族裔(-36%),但社会性SDOH的记录增加,例如社会孤立(+65%)、经济压力(+76%)、压力(+63%)。 本研究表明,使用NLP系统性地从泌尿生殖系统肿瘤临床记录中提取SDOH是可行且有效的。所记录SDOH的高流行率凸显了其对癌症治疗提供的潜在影响,并强调了对每位患者常规记录SDOH的重要性。COVID-19导致SDOH记录模式发生了显著转变,出现了更多因疫情加剧的社会障碍。未来工作应侧重于验证SDOH指导决策的临床影响。其他方向包括利用大语言模型(LLM)推断SDOH特征的存在或影响,以及分析所提取的SDOH信息以获得临床和社会层面的洞见。
查看英文原文 English abstract
Mounting evidence demonstrates that social determinants of health (SDOH) significantly impact cancer care, contributing to persistent disparities in prevention, diagnosis, treatment access and survival rates that disproportionately affect vulnerable populations. However, SDOH are frequently underreported in clinical notes, obscuring barriers for patients to receive appropriate care. The systematic extraction from clinical notes remains challenging. We developed an advanced Natural Language Processing (NLP) based Artificial Intelligence (AI) platform to automatically extract SDOH from genitourinary cancer clinical notes. We analyzed 757,757 clinical notes from 5,585 patients (prostate:n=3,772; bladder:n=619; renal:n=1,194, based on ICD) using the AI platform. The platform used NLP to extract 19 types of SDOH features (e.g. race, ethnicity, health literacy, substance abuse, financial strain, social isolation, etc) across four note types: Progress Notes, Consults, Care Plans, Patient Instructions. The AI platform extracted 767,000 SDOH mentions from 4,464 patients (80% of patients). 140 clinical notes across 21 patients were randomly selected to evaluate AI accuracy. Of 140 notes, AI found SDOH features in 131 notes and clinicians from University of Illinois Cancer Center manually determined that 124 notes contained fully accurate SDOH extractions, while 7 notes had partially inaccurate SDOH extractions, yielding 95% accuracy (124/131). The study showed high prevalence of mentions of health literacy (96.71%), substance use (93.15%), and mood/affect issues (81.41%). 65% patients had minimal SDOH documentation (1.4 features per patient) and 35% patients had multiple SDOH documentation (6.9 features per patient). Among 2,900 patients who were diagnosed with genitourinary cancer in 2018-2023 (317,143 SDOH mentions after removing boilerplate SDOH mentions), by analyzing COVID-19 impact (pre vs post March 2020), we found that documentation of demographic SDOH decreased, e.g. home address (-37%), race (-34%), ethnicity (-36%), but the social SDOH increased, e.g. social isolation (+65%), financial strain (+76%), stress (+63%). This study shows the feasibility and effectiveness of using NLP to systematically extract SDOH from genitourinary cancer clinical notes. The high prevalence of documented SDOH underscores their potential impact on cancer care delivery and emphasizes the importance of routine SDOH documentation for every patient. COVID-19 caused a significant shift in SDOH documentation patterns with more pandemic-exacerbated social barriers. Future work should focus on validating the clinical impact of SDOH-informed decision making. Additional directions include leveraging large language models (LLMs) to infer the presence or impact of SDOH features and analyzing extracted SDOH information for clinical and societal insights.
利益披露 Disclosure
N. Thakur, None. N. Reizine, Astrazeneca Independent Contractor. Merck Independent Contractor. Tempus Independent Contractor. Janssen Independent Contractor. Dava Oncology Travel. K. Tawagi, AstraZeneca Other, Speaker's Bureau. Seagen Other, Advisory Board. Pfizer Other, Advisory Board. OncLive Other, Invited Speaker. C. Hobeika, None. A. Tanwar, Pangaea Data Employment. G. Tao, Pangaea Data Employment. M. Chowdhury, Pangaea Data Employment. E. Garrad, None.. A. Wahab, None. J. Zhang, Pangaea Data Employment, Stock Option. V. Gupta, Pangaea Data Employment, Stock, Other Business Ownership. V. Gadi, TempusAI Stock. Novartis Other, Advisory Board. Novilla Stock. Phoenix Molecular Designs Stock. Gilead Other, Advisory Board. Illumina ). Hologic Other, Advisory Board. Puma Other, Advisory Board. Stemline Other, Advisory Board. AstraZeneca Other, Advisory Board. Lilly Other, Advisory Board. 3rdEyeBio Stock. S. Kataria, None.

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