PO.CL01.16 · 临床研究

可扩展的AI驱动肿瘤-间质比定量用于II-III期结直肠癌的预后分层

Scalable AI-driven tumor-stroma ratio quantification for prognostic stratification in stage II-III colorectal cancer

海报缩略图:可扩展的AI驱动肿瘤-间质比定量用于II-III期结直肠癌的预后分层
编号 3938 展板 13 时间 4/20 02:00–05:00 区域 Section 48 主讲 Wei KIt Tan
分会场 Prognostic Biomarkers 2
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作者与单位 Authors & Affiliations

Wei Kit Tan1, Marcia Zhang1, Juha P. Väyrynen2, Shuji Ogino3, Mai Chan Lau1

1Bioinformatics Institute (BII), Agency of Science, Technology and Research (A*STAR), Singapore, Singapore,2Translational Medicine Research Unit, University of Oulu, Oulu, Finland,3Department of Pathology, Brigham and Women's Hospital, Boston, MA

摘要 Abstract

中文摘要
引言:肿瘤-间质比(TSR)定义为原发肿瘤内间质成分的占比,已被提议作为结直肠癌(CRC)的预后组织病理学标志物。较高的间质含量通常与II-III期疾病的较差预后相关。然而,TSR评估仍依赖人工,易受观察者间变异性影响,而现有的AI算法——通常在单机构数据集上训练和测试——缺乏用于泛化能力的独立验证。在本研究中,我们开发了一个AI驱动的TSR定量模型,在公开的癌症基因组图谱(TCGA)病理学家标注区域上训练,并使用以下预测进行验证:(i) TCGA全切片图像(WSI)和(ii) 两个大型独立CRC队列(NHS/HPFS组织微阵列(TMA))。 方法:我们在源自469张TCGA H&E图像(涵盖I-IV期CRC)病理学家标注区域(J.V.)的99,871个图像块上训练了一个SegFormer语义分割模型。该模型经训练以分割三大组织类别:肿瘤、间质及其他。为进行验证,我们将该模型应用于TCGA队列内375例II-III期CRC样本(469张训练图像的一个子集,在标注区域之外进行评估)以及537张NHS/HPFS TMA图像。TSR定义为间质面积除以间质面积与肿瘤面积之和。采用队列中位数作为截断值,将患者分层为TSR高组和TSR低组。使用Cox比例风险模型评估预后关联。 结果:计算所得的TSR值,NHS/HPFS队列范围为18.17%至100%,中位数88.56%;TCGA队列范围为11.72%至99.87%,中位数70.30%。在NHS/HPFS队列中,AI衍生的TSR高组在总生存期(HR = 1.38;95% CI = 1.06-1.81;P = 0.017)和CRC特异性生存期(HR = 1.49;95% CI = 1.03-2.15;P = 0.035)方面均显示出显著更差的结局。然而,在TCGA队列中,无论是病理学家标注的还是WSI-AI衍生的TSR,其分层对总生存期(分别为HR = 1.12,95% CI = 0.69-1.82,P = 0.647;和HR = 0.97,95% CI = 0.59-1.60,P = 0.909)和CRC特异性生存期(分别为HR = 0.79,95% CI = 0.40-1.58,P = 0.513;和HR = 0.88,95% CI = 0.43-1.77,P = 0.723)均未显示出显著的预后价值。 讨论:虽然AI衍生的TSR在NHS/HPFS队列中显示出预后意义,但在TCGA中缺乏显著性,提示其在不同队列间的泛化能力有限。值得注意的是,据我们所知,这是首个使用公认的TCGA CRC数据集评估TSR的研究。这些发现凸显出有必要进一步剖析间质组成——通过分子染色或AI驱动的免疫细胞群、间质亚型及肿瘤-免疫空间相互作用的分析——以捕获TSR背后的生物学机制,并提高其作为预后生物标志物的稳健性。
查看英文原文 English abstract
Introduction: The tumor-stroma ratio (TSR), defined as the proportion of stromal content within the primary tumor, has been proposed as a prognostic histopathologic marker for colorectal cancer (CRC). Higher stromal content is often linked to poorer prognosis in stage II-III disease. However, TSR assessment remains manual and is prone to interobserver variability, while existing AI algorithms - often trained and tested on single-institution datasets - lack independent validation for generalizability. In this study, we developed an AI-driven TSR quantification model trained on the public Cancer Genome Atlas (TCGA) pathologist-annotated regions and validated it using predictions on (i) TCGA whole-slide images (WSI) and (ii) two large independent CRC cohorts (NHS/HPFS tissue microarray (TMA)). Methods: We trained a SegFormer semantic segmentation model on 99,871 image tiles derived from pathologist-annotated regions (J.V.) from 469 TCGA H&E images spanning stage I-IV CRC. The model was trained to segment three major tissue categories: tumor, stroma, and others. For validation, we applied the model to 375 stage II-III CRC samples within the TCGA cohort (a subset of the 469 training images, evaluated beyond annotated regions) and to 537 NHS/HPFS TMA images. TSR was defined as the area of stroma divided by the sum of stromal and tumor areas. Patients were stratified into TSR-high and TSR-low groups using the cohort median as the cut-off. Prognostic associations were evaluated using Cox proportional hazard model. Results: Computed TSR values range from 18.17% to 100% with a median of 88.56% for the NHS/HPFS cohort; and range from 11.72% to 99.87% with a median of 70.30% for the TCGA cohort. In the NHS/HPFS cohort, AI-derived TSR-high group showed significantly worse outcomes for overall survival (HR = 1.38; 95% CI = 1.06-1.81; P = 0.017) and CRC-specific survival (HR = 1.49; 95% CI = 1.03-2.15; P = 0.035). However, in the TCGA cohort, TSR stratification showed no significant prognostic value for either pathologist-annotated or WSI-AI-derived TSR for overall survival (HR = 1.12, 95% CI = 0.69-1.82; P = 0.647, and HR = 0.97; 95% CI = 0.59-1.60; P = 0.909, respectively) and CRC-specific survival (HR = 0.79, 95% CI = 0.40-1.58; P = 0.513, and HR = 0.88; 95% CI = 0.43-1.77; P = 0.723, respectively). Discussion: While AI-derived TSR showed prognostic significance in the NHS/HPFS cohort, the lack of significance in TCGA suggests limited generalizability across cohorts. Notably, this is, to our knowledge, the first study to evaluate TSR using the well-established TCGA CRC dataset. These findings highlight the need to further dissect the stromal composition - through molecular staining or AI-driven profiling of immune populations, stromal subtypes, and tumor-immune spatial interactions - to capture the biological mechanisms underlying TSR and improve its robustness as a prognostic biomarker.
利益披露 Disclosure
W. Tan, None.. M. Zhang, None.. J. P. Väyrynen, None. S. Ogino, Sanofi Pasteur S.A. Other, Consulting. M. Lau, None.

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