PO.BCS02.06 · 生物信息与计算

使用真实世界Moffitt癌症中心队列对免疫治疗应答模型进行独立验证

Independent validation of the immunotherapy response model using real-world Moffitt Cancer Center cohort

海报缩略图:使用真实世界Moffitt癌症中心队列对免疫治疗应答模型进行独立验证
编号 4227 展板 23 时间 4/21 09:00–12:00 区域 Section 5 主讲 Isis Narvaez-Bandera, BS;MS;PhD
分会场 Machine Learning Approaches for Cancer Prediction
查看 PDF 下载 PDF 🔒 查看 / 下载完整 PDF 需登录并开通下载套餐 · 查看套餐 / 开通 AACR 官方页面

作者与单位 Authors & Affiliations

Isis Yanina Narvaez-Bandera, Alyssa Pybus, Tosin Jolaogun, Paulo C. Morais Lyra, Jeremy Goecks

Machine Learning, Moffitt Cancer Center, Tampa, FL

摘要 Abstract

中文摘要
免疫检查点阻断(ICB)彻底改变了癌症治疗,然而许多患者获益有限或出现不良反应。因此,识别患者何时可能对ICB治疗产生良好应答变得至关重要,从而指导治疗决策并改善结局。尽管多项研究已将机器学习(ML)应用于临床和实验室数据以预测ICB应答,但在大型真实世界队列中的独立验证仍然有限。这一空白部分源于可用队列数量少,限制了模型的泛化能力并阻碍了更广泛的临床应用。为拓展最具前景的模型——即已发表的基于Logistic回归的免疫治疗应答评分(LORIS),我们使用Moffitt癌症中心收集的数据进行了外部验证。我们分析了2011至2025年间在Moffitt接受ICB治疗的2,090例晚期黑色素瘤(n=908)、非小细胞肺癌(NSCLC;n=878)和肾细胞癌(RCC;n=304)患者。从患者记录中提取了原始LORIS模型所用的六项临床和实验室特征——年龄、癌症类型、既往系统治疗、白蛋白、中性粒细胞与淋巴细胞比值以及肿瘤突变负荷。实施了两种验证策略。第一,我们通过将已发表LORIS模型的系数直接应用于Moffitt数据来评估该模型;未进行重新训练,所有患者仅用于测试,既在每种癌症类型内进行,也在合并的泛癌队列中进行。第二,为评估模型可重复性,我们使用Moffitt队列80/20的训练-测试划分训练了一个新的Logistic回归模型,并将其性能与LORIS进行比较。所有评估均采用治疗前1个月和6个月窗口,模型性能以AUC量化。检查了特征贡献以识别驱动应答的预测因子。ICB应答预测性能在不同疾病间差异显著。最高性能见于RCC,其AUC达到0.85(治疗前1个月)和0.84(治疗前6个月)。黑色素瘤表现中等(AUC 0.71-0.74),而NSCLC表现较低(AUC 0.53-0.55),导致我们泛癌模型的判别能力降低(AUC 0.56-0.61)。纳入程序性死亡配体1(PD-L1)并未持续改善预测,在若干情形下反而降低了性能。1个月和6个月治疗前窗口的模型性能相似。这项大规模真实世界验证证实了RCC和黑色素瘤存在部分可重复的预测信号,但也凸显了在NSCLC和异质性队列中的局限性。我们的发现强调需要拓展多模态方法以改善ICB应答预测的临床适用性。
查看英文原文 English abstract
Immune checkpoint blockade (ICB) has revolutionized cancer therapy, yet many patients derive limited benefit or experience adverse effects. Thus, it becomes crucial to identify when a patient is likely to respond well to ICB treatment, thereby guiding treatment decisions and improving outcomes. Although several studies have applied machine learning (ML) to clinical and laboratory data to predict ICB response, independent validation in large, real-world cohorts remains limited. This gap, driven in part by the small number of available cohorts, restricts model generalizability and hinders broader clinical use. To expand on the most promising model, published as a logistic regression-based immunotherapy-response score (LORIS), we performed external validation using data collected at Moffitt Cancer Center.We analyzed 2,090 patients with advanced melanoma (n=908), non-small cell lung cancer (NSCLC; n=878), and renal cell carcinoma (RCC; n=304) treated with ICB at Moffitt between 2011-2025. The six clinical and laboratory features used in the original LORIS model-age, cancer type, prior systemic therapy, albumin, neutrophil-to-lymphocyte ratio, and tumor mutational burden-were extracted from patient records. Two validation strategies were implemented. First, we evaluated the published LORIS model by directly applying its coefficients to the Moffitt data; no retraining was performed, and all patients were used exclusively for testing, both within each cancer type and in a combined pan-cancer cohort. Second, to assess model reproducibility, we trained a new logistic regression model using an 80/20 train-test split of the Moffitt cohort and compared its performance with LORIS. All evaluations used 1- and 6-month pretreatment windows, with model performance quantified by AUC. Feature contributions were examined to identify predictors driving response.ICB response prediction performance varied substantially across diseases. The highest performance was observed in RCC, where achieved an AUC of 0.85 (1-month pretreatment) and 0.84 (6-month pretreatment). Melanoma showed moderate performance (AUC 0.71-0.74), while NSCLC had lower performance (AUC 0.53-0.55), contributing to the reduced discriminative ability of our pan-cancer model (AUC 0.56-0.61). Incorporating Programmed Death-Ligand 1 (PD-L1) did not consistently improve predictions and in several settings decreased performance. Model performance was similar between 1-month and 6-month pretreatment windows.This large-scale real-world validation confirms partially reproducible predictive signals for RCC and melanoma but highlights limitations in NSCLC and heterogeneous cohorts. Our findings underscore the need for expanded multimodal approaches to improve clinical applicability of ICB response prediction.
利益披露 Disclosure
I. Y. Narvaez-Bandera, None.. A. Pybus, None.. T. Jolaogun, None.. P. C. Morais Lyra, None.. J. Goecks, None.

← 返回 AACR 2026 检索