PO.CH01.03 · 化学

发现一种新型选择性脑渗透CDK4抑制剂用于靶向癌症治疗

Discovery of a novel, selective brain penetrant CDK4 inhibitor for targeted cancer therapy

海报缩略图:发现一种新型选择性脑渗透CDK4抑制剂用于靶向癌症治疗
编号 5125 展板 8 时间 4/21 09:00–12:00 区域 Section 38 主讲 Boris Rogovoy, PhD
分会场 New Ligands and Inhibitors
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作者与单位 Authors & Affiliations

Boris Rogovoy1, Dmitrii Shkil2, Ruben Karapetian2, Elena Bulanova2, Alexei Rjakhovskiy2, Sergey Shevyakov2, Tudor Oprea3, Amy Burd1, Iain Dukes1, Nikolay Savchuk1

1Eilean Therapeutics, Dover, DE,2ChemDiv Inc, San Diego, CA,3Expert Systems, Inc., San Diego, CA

摘要 Abstract

中文摘要
在乳腺癌及其他恶性肿瘤中,CDK4过度激活通常由持续的内分泌和促有丝分裂输入、cyclin D1表达失调、INK4家族抑制因子的遗传缺失或功能损伤,或p16等内源性抑制因子的缺失所致。已获批的CDK4/6抑制剂(palbociclib、ribociclib和abemaciclib)与血液学毒性相关,包括中性粒细胞减少,这与CDK6而非CDK4的抑制有关。由于这些药物阻断CDK6,药物剂量受骨髓抑制而非抗肿瘤疗效的限制。HR+乳腺癌细胞的增殖更依赖CDK4而非CDK6,而正常造血则主要依赖CDK6。单独缺失CDK4不会损害小鼠的血细胞发育,而CDK6及其伴侣cyclin D3在干细胞激活、红系和髓系分化以及中性粒细胞维持中发挥关键作用。这种差异确立了一个治疗窗口:选择性阻断CDK4可抑制肿瘤生长,同时保留骨髓功能。已有文献记录脑转移患者的临床获益。然而,剂量限制性毒性可能会阻碍总体结局的改善。CDK4选择性抑制代表了靶向细胞周期失调的一种战略性演进。通过保留CDK6,这些药物旨在克服双重CDK4/6抑制剂的主要毒性障碍,实现更强效和持续的CDK4阻断。在此,我们描述了AL-0433,一种新型选择性脑渗透CDK4抑制剂,具有优异的体外和体内活性。 方法:AL-0433采用耐药感知、基于结构的设计,通过Expert Systems的AI赋能虚拟筛选和药物化学开发而成。在生化实验中评估了其对CDK1、2、4、6、9和GSK3b的效力,并在乳腺癌、卵巢癌和胶质母细胞瘤细胞系中评估了细胞毒性。在鼠和犬中表征了药代动力学(PK)特性。在MCF-7异种移植模型中,作为单药及与其他抗肿瘤药物联用,测试了抗肿瘤疗效。 结果:AL-0433表现出低纳摩尔级CDK4抑制(2.7 nM),对CDK6具有30倍选择性,对CDK1、CDK2和CDK9具有1000倍选择性。AL-0433在乳腺癌、卵巢癌和胶质母细胞瘤细胞中表现出强效细胞毒性(20-950 nM)。在MCF-7细胞中的作用机制研究表明其抑制pRB磷酸化。AL-0433展现出优异的口服生物利用度和高血脑屏障(BBB)通透性,使其在治疗原发性和转移性肿瘤以及胶质母细胞瘤等脑肿瘤方面尤为有利。 结论:AL-0433是一种有前景的、AI设计的选择性CDK4抑制剂,在乳腺癌、卵巢癌和胶质母细胞瘤细胞系中具有广泛活性。其良好的PK特征、临床前疗效和合理的设计策略支持其进一步临床开发。
查看英文原文 English abstract
In breast and other malignancies, CDK4 overactivation commonly occurs as a result of sustained endocrine and mitogenic inputs, dysregulated cyclin D1 expression, or the genetic loss or functional impairment of INK4 family inhibitors, or loss of endogenous inhibitors such as p16. Approved CDK4/6 inhibitors (palbociclib, ribociclib, and abemaciclib) are associated with hematologic toxicity, including neutropenia, linked to CDK6 rather than CDK4 inhibition. Since these drugs block CDK6, drug dosing is restricted by bone marrow suppression rather than anti-tumor efficacy. HR+ breast cancer cells are more dependent on CDK4 than CDK6 for proliferation, whereas normal hematopoiesis relies predominantly on CDK6. Loss of CDK4 alone does not impair blood cell development in mice, while CDK6 and its partner cyclin D3 play a key role in stem cell activation, erythroid and myeloid differentiation, and neutrophil maintenance. This divergence establishes a therapeutic window: Selective blockade of CDK4 could suppress tumor growth while sparing bone marrow function. Clinical benefits in patients with brain metastases have been documented. However, dose-limiting toxicity may prevent the gain in overall outcome. CDK4-selective inhibition represents a strategic evolution in targeting cell-cycle dysregulation. By sparing CDK6, agents aim to overcome the main toxicity barrier of dual CDK4/6 inhibitors, enabling more potent and sustained CDK4 blockade. Here, we describe AL-0433, a novel, selective brain penetrant CDK4 inhibitor with excellent in vitro and in vivo activity. Methods: AL-0433 was developed using resistance-aware, structure-based design, via AI-enabled virtual screening and medicinal chemistry at Expert Systems. Potency was evaluated against CDK1, 2, 4, 6, 9, and GSK3b in biochemical assays, and cytotoxicity was assessed in breast, ovarian, and glioblastoma cell lines. Pharmacokinetic (PK) properties were characterized in murines and dogs. Anti-tumor efficacy was tested in MCF-7 xenograft models as a single agent and in combination with other anti-tumor agents. Results: AL-0433 exhibited low-nanomolar CDK4 inhibition (2.7 nM) with 30-fold selectivity over CDK6, and 1000-fold selectivity over CDK1, CDK2, and CDK9. AL-0433 showed potent cytotoxicity in breast, ovarian, and glioblastoma cells (20-950 nM). Mechanism of action studies in MCF-7 cells demonstrated inhibition of pRB phosphorylation. AL-0433 demonstrated excellent oral bioavailability with high blood-brain barrier (BBB) permeability, making it particularly advantageous for treating both primary and metastatic tumors, as well as brain tumors such as glioblastoma. Conclusion: AL-0433 is a promising, AI-designed, selective CDK4 inhibitor with broad activity across breast, ovarian, and glioblastoma cell lines. Its favorable PK profile, preclinical efficacy, and rational design strategy support further clinical development
利益披露 Disclosure
B. Rogovoy, Eilean Therapeutics Employment. Expert Systems Employment. D. Shkil, ChemDiv Inc Employment. R. Karapetian, ChemDiv Inc Employment. E. Bulanova, ChemDiv Inc Employment. A. Rjakhovskiy, ChemDiv Inc Employment. S. Shevyakov, ChemDiv Inc Employment. T. Oprea, Expert Systems Inc Employment. Dompe Farmaceutici srl ). A. Burd, Eilean Therapeutics Employment. I. Dukes, Eilean Therapeutics g., Board of Directors, non-salaried role). Orbimed Employment. N. Savchuk, Eilean Therapeutics g., Board of Directors, non-salaried role). Torrey Pines Investments Employment.

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