PO.CL11.01 · 临床研究
克隆之战:一个采用系列NGS分析的癌症幸存者纵向前瞻性队列中克隆稳定性的证据
Clone wars: Evidence of clonal stability in a longitudinal prospective cohort of cancer survivors with serial NGS analysis
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
引言:携带白血病前突变的造血干细胞和祖细胞,统称为克隆性造血(CHIP),是髓系肿瘤(MN)的细胞起源。虽然MN发生风险各不相同,但其自然史和转化潜能仍未明确定义。我们呈现来自我们正在进行的10年CHIP方案的发现,该方案使用系列NGS监测癌症幸存者的克隆演变和MN。
方法:对2020年3月至2024年6月的210例前瞻性患者进行回顾性分析。若变异等位基因频率(VAF)≥2%(IDH1、IDH2和JAK2为≥1%),则将突变分类为CHIP+。克隆演变通过经年龄相关增长校正的每年VAF变化来评估(例如根据已发表数据,DNMT3A每年增长约2%)。突变分类为缓慢增长(≤5%/年:DNMT3A、TET2、ASXL1)、中等增长(5-10%/年:TP53、PPM1D、IDH1/2、KRAS、NRAS、SF3B1)或快速增长(>10%/年:JAK2、SRSF2)。采用Pearson卡方检验、Fisher精确检验和Wilcoxon秩和检验。
结果:在210例患者中,42例(20%)至少有一个CHIP+突变。CHIP+患者的中位年龄高于CHIP-患者(66岁对59岁,p<0.001)。CHIP+与性别、种族、家族史、吸烟、饮酒、既往癌症类型(如乳腺、头颈部)或治疗(化疗、放疗、手术)无显著关联。在487份样本中,56份检测到体细胞突变。最常见的突变为DNMT3A(n=27)、PPM1D(n=10)和TET2(n=9)。根据预期增长动力学,37个(66%)突变为缓慢增长,12个(21.4%)为中等增长,2个(3.5%)为快速增长,4个(7.14%)为动力学类别未知。
除基于VAF动力学的进展外,12例患者在随后年份出现新突变——DNMT3A(n=8)、PPM1D(n=2)。有些后来变得不可检测,提示为短暂性克隆。总计在本研究5年期间,12例患者(1例按VAF动力学,11例按新突变获得)发生克隆进展(5.7%)。
6例患者在第2年发生消退,基因突变VAF变得不可检测。这些包括PPM1D(n=2)、CBL(n=2)、TP53(n=1)和DNMT3A(n=1)的突变。另有3例患者在第3年消退,1例在第4年消退。总共10例患者在5年期间显示消退(17.8%)。值得注意的是,10例中有5例曾因心脏合并症接受干预。总体而言,约94%的患者表现出克隆稳定/消退。缓慢增长的突变——DNMT3A和TET2的中位增长率分别为0.83%和2.11%(历史增长率≤5%)。中等增长的突变如TP53和PPM1D的中位增长率分别为1.64%和-0.625%,低于预期的5-10%的年度增长。快速增长突变JAK2的增长率也较低,为0.19%。
结论:尽管由于既往实体恶性肿瘤以及化疗/放疗暴露而属于高风险人群,我们这项五年纵向研究中的大多数患者显示出克隆稳定。即使在发生进展的患者中,检测后的VAF动力学仍保持稳定。CHIP与心血管疾病的炎症联系提示,预防性心脏病学可能影响克隆行为。
查看英文原文 English abstract
Introduction: Hematopoietic stem and progenitor cells with preleukemic mutations (mut n s), collectively termed clonal hematopoiesis (CHIP) serve as the cellular origin of myeloid neoplasms (MN). While risk of MN development varies, its natural history and transformation potential remain poorly defined. We present findings from our ongoing 10-year CHIP protocol using serial NGS to monitor clonal evolution and MN in cancer survivors.
Methods: Retrospective analysis of 210 prospective pts from March 2020 to June 2024. Mut n s were classified CHIP+ if they had a variant allele frequency (VAF) ≥2% (or ≥1% for IDH1, IDH2 , and JAK2 ). Clonal evolution was evaluated by annual VAF changes adjusted for age-related increases (e.g. DNMT3A increases by ~2%/yr based on published data). Mut n s were classified as slow (≤5%/yr: DNMT3A, TET2, ASXL1 ), intermediate (5-10%/yr: TP53, PPM1D, IDH1/2, KRAS, NRAS, SF3B1 ), or fast-growing (>10%/yr: JAK2, SRSF2 ). BPearson's Chi-squared, Fisher's exact, and Wilcoxon rank-sum tests were used.
Results: Of 210 pts, 42 (20%) had at least one CHIP+ mut n . Median age was higher in CHIP+ vs. CHIP- pts (66 vs. 59 years, p<0.001). CHIP+ was not significantly associated with sex, race, family history, smoking, alcohol use, prior cancer types (e.g., breast, head and neck) or treatment (chemo, radiation, surgery). Of 487 samples, 56 had detectable somatic mut n s. The most frequent mut n were DNMT3A (n=27), PPM1D (n=10), and TET2 (n=9). By expected growth kinetics, 37 (66%) mut n were slow-growing, 12 (21.4%) intermediate, 2 (3.5%) fast-growing, and 4 (7.14%) of unknown kinetic category.
Beyond VAF-kinetics-based progression, 12 pts developed new mut n in subsequent years - DNMT3A (n=8), PPM1D (n=2). Some later became undetectable, suggesting transient clones. In total, 12 pts (1 by VAF kinetics, 11 by new mut n acquisition) clonally progressed over 5 years of this study (5.7%).
6 pts regressed by year 2, with gene mut n VAFs becoming undetectable. These included mut n in PPM1D (n=2), CBL (n=2), TP53 (n=1), and DNMT3A (n=1). Three more pts regressed in year 3, and 1 in year 4. In all, 10 pts showed regression over 5 years (17.8%). Notably, 5 of 10 had received interventions for cardiac comorbidities. Overall, ~94% pts had clonal stability/regression. Slow-growing mut n s - DNMT3A and TET2 had median rates of 0.83% and 2.11%, (historical rates ≤5%). Intermediate mut n s like TP53 and PPM1D had median rates of 1.64% and -0.625%, below the expected 5-10% annual rise. JAK2 , a fast-growing mut n , also showed a lower rate of 0.19%.
Conclusion: Despite being a high-risk population due to prior solid malignancy and exposure to chemo/radiation, most pts in our five-year longitudinal study showed clonal stability. Even among those who progressed, VAF kinetics remained stable post-detection. CHIP's inflammatory link to cardiovascular disease suggests preventive cardiology may impact clonal behavior.
利益披露 Disclosure
A. Goyal, None.
A. Jain,
Servier ).
Novartis ).
Rigel Consultancy.
Geron Consultancy.
Takeda Consultancy.
Sobi Consultancy.
S. Singh, None..
Y. Ni, None..
E. Samsa, None..
K. Sykes, None..
S. Patil, None.
A. Singh,
Novartis ).