PO.MCB09.05 · 分子与细胞生物学
基于脂质代谢相关蛋白构建小细胞肺癌预后模型
Construction of a prognostic model for small-cell lung cancer based on lipid metabolism related proteins
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
小细胞肺癌(SCLC)是一种侵袭性极强、预后不良的肿瘤。目前迫切需要开发新型生物标志物,以识别高危SCLC患者并优化个体化治疗策略。我们对来自105例SCLC患者的120个肿瘤样本(90个原发灶、15个淋巴结、15个脑转移灶)开展了全面的、基于质谱的蛋白质组学分析。代谢转变已成为癌症的一个标志性特征。此外,在我们此前基于这种深度、无偏倚蛋白质组学图谱的研究中,我们发现脂质代谢与SCLC的复发和转移之间存在相关性。本分析旨在利用脂质代谢相关蛋白构建SCLC的预后风险评分,并探索其潜在的分子生物学机制。我们首先鉴定出940个与脂质代谢相关的蛋白,其中51个与患者预后相关。无监督共识聚类结果显示SCLC存在两种不同的脂质代谢模式,且与患者预后和免疫细胞浸润相关。通过LASSO回归进一步鉴定出8个与生存相关的脂质代谢蛋白,用于构建预后风险评分,该评分是SCLC患者的独立预后因素,并在一个独立队列中得到验证。通过对低风险组和高风险组之间差异表达蛋白的通路富集分析,揭示了风险评分与神经元特征及抗肿瘤免疫应答之间的相关性。最后,与高风险组相比,低风险组对几乎所有化疗和靶向治疗药物均表现出显著更高的敏感性。
查看英文原文 English abstract
Small cell lung cancer (SCLC) is a highly invasive tumor with poor prognosis. There is an urgent need to develop novel biomarkers to identify patients with high-risk SCLC and optimize individual treatment strategies. We conducted a comprehensive, mass spectrometry-based proteomic analysis of 120 tumors (90 primary, 15 lymph node, 15 brain) from 105 SCLC patients. Metabolic transformation has become a hallmark of cancer. Additionally, we have found a correlation between lipid metabolism and the recurrence and metastasis of SCLC in our previous study, based on this deep, unbiased proteomic profiling. This analysis aimed to construct a prognostic risk score for SCLC using lipid metabolism related proteins and explore the underlying molecular biological mechanisms. We first identified 940 proteins related to lipid metabolism, of which 51 were associated with the prognosis of patients. The unsupervised consensus clustering results showed two different lipid metabolism patterns for SCLC, which was associated with patient prognosis and immune cell infiltration. Eight survival related lipid metabolism proteins were further identified through LASSO regression to construct a prognostic risk score, which is an independent prognostic factor for SCLC patients and validated in an independent cohort. The correlation of risk score with neuronal characteristics and anti-tumor immune response was revealed through pathway enrichment analysis of differentially expressed proteins between low-risk and high-risk groups. Finally, low-risk group showed significantly higher sensitivity to almost all chemotherapy and targeted therapy drugs compared to the high-risk group.
利益披露 Disclosure
H. Zhu, None..
A. Yu, None..
H. Shi, None..
J. Lu, None..
K. Zhu, None..
M. Wang, None..
Y. Liu, None..
N. Zheng, None..
X. Hu, None.