PO.IM01.14 · 免疫学
在MM细胞存在GPRC5D的情况下,Talquetamab改变T细胞转录组
T cell transcriptome is altered by Talquetamab in presence of GPRC5D on MM cells
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
背景:G蛋白偶联受体C类第5组成员D(GPRC5D)已成为多发性骨髓瘤(MM)中一个有前景的免疫靶点。Talquetamab是一种靶向GPRC5D的双特异性抗体,在三类难治性MM患者中显示出70%的疗效,然而常观察到基因组缺失介导的复发。为更好地理解talquetamab、GPRC5D缺失与免疫微环境中T细胞之间的相互作用,我们对GPRC5D缺失模型与健康T细胞在有或无talquetamab存在下的共培养进行了单细胞测序。
方法:使用CRISPR-Cas9技术生成GPRC5D单等位基因和双等位基因敲除模型。使用健康T细胞在有或无talquetamab下建立共培养24小时。进行CITE-seq。采用TotalSeq-C抗体进行细胞标记(cell hashing)以实现多重化。汇集的细胞经过10x Genomics 5' GEM-X流程处理,并在Illumina NovaSeq X Plus上测序。使用Wilcoxon秩和检验评估差异基因表达,并使用AddModuleScore计算干扰素反应评分。
结果:通过CITE-seq观察到,GPRC5D单等位基因和双等位基因缺失均可引起MM细胞显著的转录组变化。基于经典标志物(IL2RA、IRF4、TNFRSF4-18、TNF、IFNG)的表达,CD4和CD8活化T细胞仅在talquetamab和GPRC5D+细胞存在下观察到,而在用GPRC5D Del/Del模型刺激时完全消失。在T细胞亚群中观察到,在talquetamab和MM细胞上存在GPRC5D时,干扰素刺激基因(GBP2-4-5、IFI44、IFIT2、ISG15)显著诱导(p值<0.001,绝对log2FC>2)。发现即使在共培养中缺乏GPRC5D+细胞的情况下,仅talquetamab也可上调T细胞中的干扰素信号基因(STAT1、IRF1)。此外,我们还鉴定出仅在GPRC5D和talquetamab存在下上调的基因,包括SOCS3、CD69、JUNB、BATF、CISH和PRDM1,表明这些T细胞具有独特的活化状态。对T细胞亚型进行的基因集富集分析显示,在CD4、CD8、Tcm和Treg群体中IFN-gamma和IFNA信号富集(NES>2.0,FDR 0.0)。此外,发现IL2-STAT5信号和炎症反应(NES>2.0,FDR 0.0)通路仅在talquetamab和GPRC5D+细胞存在下富集。值得注意的是,在缺乏talquetamab的情况下,T细胞转录组特征不因MM细胞上GPRC5D的存在与否而改变。
结论:我们的研究结果表明,即使在缺乏GPRC5D的情况下,talquetamab也可上调T细胞中干扰素信号基因的表达,且当MM细胞上存在GPRC5D时该反应增强。此外,talquetamab改变T细胞各亚群的活化特征,且共培养中不同T细胞亚群的丰度和分布均因MM细胞的GPRC5D状态而改变。
查看英文原文 English abstract
Background : G protein-coupled receptor class C group 5 member D (GPRC5D) has emerged as a promising immune target in multiple myeloma (MM). Talquetamab, a GPRC5D-directed bispecific antibody, has shown an efficacy of 70% in triple class refractory MM patients however, genomic loss mediated relapse is often observed. To better understand the interplay of talquetamab, GPRC5D loss and T cells within the immune microenvironment, we performed single cell sequencing on a coculture of GPRC5D loss models and healthy T cells in presence and absence of talquetamab.
Methods : GPRC5D mono- and biallelic knockout models were generated using CRISPR-Cas9 technology. Cocultures were established using healthy T cells with or without talquetamab for 24 hours. CITE-seq was performed. Cell hashing with TotalSeq-C antibodies enabled multiplexing. Pooled cells underwent 10x Genomics 5' GEM-X workflow and were sequenced on Illumina NovaSeq X Plus. Differential gene expression was assessed using the Wilcoxon rank-sum test, and interferon response scores were calculated using AddModuleScore.
Results: Pronounced transcriptomic changes in MM cells were observed with both mono- and bi-alleic loss of GPRC5D via CITE-seq. Based on the expression of canonical markers ( IL2RA, IRF4, TNFRSF4-18, TNF, IFNG ), CD4 and CD8 activated T cells were only observed in presence of talquetamab and GPRC5D + cells and completely disappeared when stimulated with GPRC5D D el/ D el models. A significant induction of interferon stimulated genes ( GBP2-4-5, IFI44, IFIT2, ISG15 ) in presence of talquetamab with GPRC5D on MM cells (p-value < 0.001, absolute log2FC > 2) was observed across T cell subpopulations. Interferon signaling genes ( STAT1, IRF1 ) were found to be upregulated in T cells by talquetamab alone even in absence of GPRC5D + cells in coculture. Additionally, we also identified genes only upregulated in presence of GPRC5D and talquetamab, including SOCS3, CD69, JUNB, BATF, CISH , and PRDM1 , indicating a unique activation status of these T cells. Gene set enrichment analysis performed on T cell sub types indicated an enrichment of IFN-gamma and IFNA-signaling (NES>2.0, FDR 0,0) in CD4, CD8, Tcm and Treg populations. Additionally, IL2-STAT5 signaling and inflammatory response (NES>2.0, FDR 0.0) pathways were found to be enriched only in presence of talquetamab and GPRC5D + cells. Of note, in the absence of talquetamab, T cells transcriptomic profile did not change in response to GPRC5D presence or absence on MM cells.
Conclusions: Our findings demonstrate that talquetamab upregulates the expression of interferon signaling genes in T cells even in the absence of GPRC5D and this response is enhanced when GPRC5D is present on MM cells. Moreover, talquetmab alters the activation profile across T cells subsets and both abundance and distribution of different T cells subpopulations is changed by GPRC5D status of the MM cells in coculture.
利益披露 Disclosure
U. Munawar, None..
A. Leipold, None..
S. Han, None..
S. Nerreter, None..
S. Kurian, None..
E. Besant, None..
N. Rein, None..
J. Lehmann, None..
M. Koeppel, None..
X. Zhou, None..
H. Einsele, None..
L. Rasche, None..
E. Saliba, None..
J. Waldschmidt, None..
M. Kortuem, None.