PO.PS01.08 · 人群科学
将肿瘤与专利到期的靶向治疗(TT)进行合理配对:面向弱势患者的具有全球应用价值的下一代(第3代)测序!
Rational pairing of tumors with off-patent targeted therapies (TT): Next 3 generation sequencing with global applications for the unprivileged patients!
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摘要 Abstract
中文摘要
自伊马替尼作为首个 TT 取得成功以来,为类似方法鉴定合理靶点的尝试已获得极大重视。癌症的定义是产生持续激活的癌基因(O)的基因组改变。传统上,这是通过原癌基因中的克隆性 DNA 改变推断出来的,这成为在新一代测序(NGS)平台中鉴定可采取行动改变的基础(在 <25% 的病例中成功)。突变、易位和扩增产生‘持续的’病理状态,但这也可源于转录因子(TF)或配体(针对受体型 O)的 DNA 扩增。TT 的定价超出了无保险或贫困人群的承受范围。然而,少数 TT 专利已到期,其价格可承受的制剂即使在弱势社区也能获得这类药物。我们假设,如果使用扩展但科学合理的标准来鉴定治疗靶点,相当一部分癌症可能会被合理地配对到专利到期的 TT。方法:我们检查了癌症基因组图谱(The Cancer Genome Atlas),寻找对某个包含性 O 列表呈野生型但过表达的病例。我们报告了受体型 O 的 TF 或配体的扩增情况。然后我们检查该列表,寻找可从非专利 TT 中获益的病例。我们还报告了转录性 O 活性增加的病例。当有超过 5 个病例时,纳入所有组织学类型/分期。结果:表中按所检查的肿瘤类型报告了研究结果。结论:我们的方法在 9-60% 的基因组定义的 O 中,为弱势患者提供了经典 NGS 原本不会考虑的可承受 TT。将 O 与有效 TT 配对应超越经典 NGS 标准。TF 和配体中的相关 DNA 事件在 O 野生型癌症中似乎发挥着可变的作用,具体取决于组织学类型(在胰腺、肾脏、甲状腺和胶质瘤中为 0%)。在其他类型中,该发现见于 13-100% 的病例。
查看英文原文 English abstract
Since the success of imatinib as the inaugural TT, attempts to identify rational targets for similar approaches have gained prime importance. Cancer is defined by genomic alterations producing constantly activated oncogenes (O). Classically, this was inferred by clonal DNA alterations in proto-oncogenes which became the basis for identifying actionable changes in Next Generation Sequencing (NGS) platforms (successful in <25% of cases). Mutations, translocations and amplifications generate ‘constant' pathologic state but this can also result from DNA amplification of transcription factors (TF) or ligands (for receptor Os). TTs are priced beyond the reach of uninsured or impoverished populations. Few TTs are off-patent, however, with affordable formulations enabling access to such agents even in underprivileged communities. We hypothesized that a substantial portion of cancers might be rationally paired to off-patent TTs if extended, but scientifically sound, criteria were used to identify therapeutic targets. Methods: We examined The Cancer Genome Atlas for cases that are wild type but over-expressed for an inclusive O list. We report on amplifications of the TF or ligand of receptor Os. We then examined the list for cases that could benefit from unpatented TTs. We also report on cases with increased transcriptional O activity. All histologies/stages were included when >5 cases were available. Results: Table reports the findings per type of tumor examined. Conclusions: Our method provides underprivileged patients with affordable TTs that wouldn't have otherwise been considered with classic NGS in 9-60% of genomically defined Os. Pairing Os with effective TT should extend beyond the classic NGS criteria. Relevant DNA events in TFs and ligands seem to play a variable role in O-wild type cancers depending on histology (0% in pancreas, kidney, thyroid and glioma). In others, the finding is noted in 13-100% of cases.
利益披露 Disclosure
F. Mazahreh, None..
L. Mazahreh, None..
A. Safar, None.