PO.BCS01.14 · 生物信息与计算

揭示癌症中内在无序区域的系统水平突变图谱

Uncovering the systems-level mutational landscape of intrinsically disordered regions in cancer

海报缩略图:揭示癌症中内在无序区域的系统水平突变图谱
编号 6867 展板 11 时间 4/22 09:00–12:00 区域 Section 3 主讲 Kivilcim Ozturk, BS;MS;PhD
分会场 Network Biology and Precision Medicine
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作者与单位 Authors & Affiliations

Kivilcim Ozturk1, Hannah K. Carter2

1UC San Diego School of Medicine, La Jolla, CA,2UC San Diego, La Jolla, CA

摘要 Abstract

中文摘要
生物功能和细胞行为源自细胞内蛋白质及其他分子之间的相互作用,而癌症往往会扰乱这些相互作用,导致疾病表型。许多蛋白质包含内在无序区域(IDR),这些区域无需依赖单一明确的构象即可执行生物功能。虽然若干癌症驱动基因的IDR已成为致癌信号传导和翻译后修饰的核心介导者,但其在蛋白质-蛋白质相互作用(PPI)中的作用尚不清楚。在此,我们着手表征IDR的突变图谱,探究它们如何促成癌症中潜在蛋白质相互作用网络的扰动。对我们结构解析的PPI网络的全面分析表明,介导蛋白质相互作用的IDR显著地成为癌症错义突变的靶点。此外,包含IDR的蛋白质在PPI网络中位置更为核心,尤其是癌症驱动基因,其中无序驱动基因比有序驱动基因显著更为核心,这表明IDR固有的构象异质性可能使其能够与更广泛的分子伙伴相互作用,从而使其易于在细胞内传播信号,并使靶向它们的突变产生更大的影响,作用于细胞活动和表型。总体而言,我们的工作证明了揭示IDR系统水平突变图谱的重要性,以识别驱动癌症发生和进展的机制,从而实现更有效的癌症治疗药物的选择和开发。
查看英文原文 English abstract
Biological functions and cellular behaviors arise from interactions among proteins and other molecules within cells, and cancers often act to perturb these interactions, resulting in disease phenotypes. Many proteins contain intrinsically disordered regions (IDR) that perform biological functions without relying on a single well-defined conformation. While IDRs of several cancer drivers have emerged as central mediators of oncogenic signaling and post-translational modifications, their role in protein-protein interactions (PPI) is less clear. Here, we set out to characterize the mutational landscape of IDRs in how they contribute to perturbation of underlying protein interaction networks in cancer. A comprehensive analysis of our structurally resolved PPI network showed that IDRs mediating protein interactions are significantly targeted by cancer missense mutations. Furthermore, proteins containing IDRs are more centrally located in the PPI network, especially cancer drivers, where disordered drivers are significantly more central than ordered ones, suggesting that the inherent conformational heterogeneity of IDRs might enable them to interact with a wider range of molecular partners, allowing them to easily propagate signals through the cell and the mutations targeting them to generate a larger impact on cellular activity and phenotypes. Overall, our work demonstrates the importance of uncovering the systems-level mutational landscape of IDRs to identify mechanisms driving cancer development and progression, enabling more effective selection and development of cancer therapeutics.
利益披露 Disclosure
K. Ozturk, None.

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