PO.BCS01.14 · 生物信息与计算

Targeting master regulators to reprogram neutrophils and enhance PD-1 blockade efficacy in castration-resistant prostate cancer

海报缩略图:Targeting master regulators to reprogram neutrophils and enhance PD-1 blockade efficacy in castration-resistant prostate cancer
编号 6859 展板 3 时间 4/22 09:00–12:00 区域 Section 3 主讲 Melania Franchini, BS;MS;PhD
分会场 Network Biology and Precision Medicine
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作者与单位

Melania Franchini1, Florencia Picech2, Cory Abate-Shen3, Andrea Califano4

1Department of Systems Biology, Columbia University, New York, NY,2Department of Molecular Pharmacology and Therapeutics, Columbia University Irving Medical Center, New York, NY,3Department of Molecular Pharmacology and Therapeutics, Department of Urology, Columbia University Irving Medical Center, New York, NY,4Dept. of Systems Biology and Dept. of Medicine and Dept. of Biomedical Informatics and Dept. of Biochemistry & Molecular Biophysics, and HICCC, Columbia University Irving Medical Center; Chan Zuckerberg Biohub, New York, NY

摘要 Abstract

Introduction: Neutrophil-mediated immunosuppression limits immunotherapy in Castration-Resistant Prostate Cancer (CRPC), but its mechanisms are unclear. This study aims to identify the drivers of this immunosuppression and evaluate whether targeting Master Regulator (MR) proteins can reprogram neutrophils, remodel the tumor microenvironment (TME), and enhance PD-1 blockade efficacy. Methods: We used orthotopic CRPC models treated with MR inhibitors and anti-PD-1 therapy to assess neutrophil depletion and immune remodeling. Spatial profiling with the 5,000-plex Xenium panel along with cell types annotation via a curated scRNA-seq atlas, revealed a detailed map of tissue organization. Treatment effects on immune populations and spatial reorganization, particularly neutrophils, were quantified. VIPER-based analysis defined MR-driven neutrophil functional states, and spatial mapping was conducted using Xenium data. Finally, ligand-receptor interactions between neutrophils and tumor cells were explored through cell-cell communication network analysis. Summary of unpublished data: We conducted a pilot Xenium study across four treatment arms (vehicle, Trametinib, anti-PD1, and combination) to assess MR inhibition's effect on immune responses through cell abundance and spatial reorganization. Anti-PD1 induced broad immune recruitment, especially neutrophils, while Trametinib had minimal effect. Combination therapy reduced neutrophil abundance below baseline, attenuating checkpoint blockade-induced neutrophil accumulation. NK/T cells, monocytes, and dendritic cells increased, while macrophages remained stable. Spatial analysis showed that anti-PD1 caused tumor cells to marginalize, while combination therapy partially restored integration. Neutrophils transitioned from marginalization to forming an immunological barrier around tumor cells, and NK/T cells interacted mainly with stromal/myeloid cells, indicating immune exclusion. Despite upregulating PD-L1 in all treatments, combination therapy induced PD-L1 expression without barrier formation, suggesting that spatial organization, not just ligand expression, drives neutrophil-mediated immune exclusion. Conclusion: Treatments reshape tumor-immune architecture without disrupting tissue organization, relying on both immune cell abundance and their spatial distribution within the TME. Anti-PD1 induces broad immune infiltration, but neutrophils form a barrier limiting tumor penetration, which is relieved by the MR-inhibitor Trametinib. Neutrophils upregulate PD-L1 across all treatments, peaking after anti-PD1, while Trametinib and combination therapy drive PD-L1 expression without barrier formation.
利益披露 Disclosure
M. Franchini, None.. F. Picech, None.. C. Abate-Shen, None. A. Califano, DarwinHealth Independent Contractor, Stock.

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