PO.TB04.01 · 肿瘤生物学
对零代患者脑肿瘤组织进行快速药物敏感性检测以指导临床前和临床决策:一项临床可行性研究的结果
Rapid drug sensitivity testing of passage-zero patient brain tumor tissues to inform preclinical and clinical decisions: results from a clinical feasibility study
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摘要 Abstract
中文摘要
功能性精准医学(FPM)为神经肿瘤学提供了一条有前景的路径,在该领域中仅凭基因组分析往往无法预测治疗反应。为弥合这一差距,我们开发了活癌外植体筛选(SLiCE)平台,这是一种快速的离体药物筛选检测方法,可对移植于活体器官型脑切片培养物(OBSCs)之上的零代患者脑肿瘤组织进行功能性检测。SLiCE检测时间仅为四天,可保留体外无法维持的关键肿瘤特征,包括基因组保真度、生长、侵袭和治疗反应,且移植成功率更高、检测速度快于体内模型。我们的标准冷冻保存流程可对以多个平行等分样本库存的单个零代标本进行可重复、可迭代、按需的检测,使SLiCE区别于类器官和精密切割肿瘤外植体模型。在此,我们描述了正在积极入组的临床可行性研究(NCT05978557)的结果,我们成功地在SLiCE上移植并检测了36例多样脑肿瘤标本中的35例,提前达到了研究的主要终点。SLiCE为所有样本产生了多参数药物敏感性评分(DSSs),每项评分均按脱靶毒性归一化,并在临床可操作的28天窗口内完成。在530次实验中,我们从独特的药物-肿瘤组合中生成了142个DSSs,形成了用于未来基准比较的参考库。随后,我们进一步分析了一组IDH-WT胶质母细胞瘤肿瘤标本,其中SLiCE的DSSs与患者对替莫唑胺的反应(AUC = 0.875,p = 0.0175)和总生存期(R² = 0.73)相关。此外,本研究验证了手术抽吸的肿瘤组织作为一种在基因组、转录组和功能上与经临床病理批准的标准手工切除残余肿瘤样本相似的肿瘤来源。收集这一常被丢弃的肿瘤来源,使累积肿瘤的质量增加了近5倍,并使得能够从另外11名患者处采集,显著增加了用于SLiCE下游检测的肿瘤组织。这些发现确立了SLiCE作为一个可扩展、临床相关的脑癌FPM平台,具有指导个体化治疗决策和加速临床前药物开发的潜力。
查看英文原文 English abstract
Functional precision medicine (FPM) offers a promising path forward in neuro-oncology, where genomic profiling alone often fails to predict therapeutic response. To bridge this gap, we developed the Screening Live Cancer Explants (SLiCE) platform, a rapid ex vivo drug screening assay that functionally tests passage-zero patient brain tumor tissues engrafted atop living organotypic brain slice cultures (OBSCs). With an assay time of just four days, SLiCE preserves key tumor characteristics not maintained in vitro , including genomic fidelity, growth, invasion, and treatment response, with higher engraftment rates and faster assay speeds than in vivo models. Our standard cryopreservation workflow enables reproducible, iterative, and on-demand testing of a single zero-passage specimen banked in multiple replicate aliquots, setting SLiCE apart from organoid and precision-cut tumor explant models. Here, we describe results from our actively accruing clinical feasibility study (NCT05978557), where we successfully engrafted and tested 35 of 36 diverse brain tumor specimens on SLiCE, achieving our study's primary endpoint ahead of schedule. SLiCE produced multi-parametric drug sensitivity scores (DSSs), each normalized to off-target toxicity, for all samples within a clinically actionable 28-day window. Across 530 experiments, we generated 142 DSSs from unique drug-tumor combinations, forming a reference library for future benchmarking. We then further analyzed a subset of IDH-WT glioblastoma tumor specimens in which SLiCE DSSs correlated with patient response to temozolomide (AUC = 0.875, p = 0.0175) and overall survival (R² = 0.73). Additionally, this study validated surgically aspirated tumor tissue as a genomically, transcriptomically, and functionally similar tumor source compared to the standard, manually excised remnant tumor sample approved by clinical pathology. Collecting this often-discarded tumor source increased the mass of tumors accrued by nearly 5-fold and enabled collection from 11 additional patients, significantly increasing tumor tissue for downstream testing on SLiCE. These findings establish SLiCE as a scalable, clinically relevant platform for FPM in brain cancer, with potential to guide individualized treatment decisions and accelerate preclinical drug development.
利益披露 Disclosure
B. Mann, None..
N. Artz, None..
A. Adefolaju, None..
A. Valdivia, None..
X. Zhang, None..
R. Dasari, None..
C. Stockwell, None..
M. Thang, None..
A. Murray, None..
N. Bell, None..
A. Buckley, None..
R. Darawsheh, None..
K. Fitzgerald, None..
J. Williams, None..
H. Parikh, None..
S. Gao, None..
J. An, None..
Y. Rodriguez, None..
D. Metzger, None..
C. Parrow, None..
D. Riley, None..
R. Seager, None..
S. B. Hastings, None..
T. Jensen, None..
S. Ramkissoon, None..
D. Higgins, None..
Y. Rauf, None..
S. Elton, None..
K. Hamilton, None..
J. Wang, None..
A. Baldwin, None..
S. Hingtgen, None..
D. Kram, None.
A. Satterlee,
Pacific Marine Biotech ).
ENZ Biopharma ).