PO.BCS01.07 · 生物信息与计算
开发一个用于识别预测恶性黑色素瘤免疫治疗反应的基于图像的数字生物标志物的AI框架
Development of an AI framework for identifying image based digital biomarkers predictive of immunotherapy response in malignant melanoma
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
背景:MelanomAIX项目开发了一个基于AI的框架,用于识别预测恶性黑色素瘤免疫治疗反应的图像衍生数字生物标志物。组织病理学切片包含丰富的亚视觉信息,反映了常规评估常常遗漏的肿瘤-免疫相互作用。通过将基于深度学习的组织特征分析与分子和临床数据相结合,MelanomAIX利用常规病理学进行生物标志物发现和精准肿瘤学。
方法:从多个临床档案中汇集了一个包含200名黑色素瘤患者的真实世界队列。每个病例均整理了数字化的H&E和PD-L1 IHC切片、详细的治疗史以及经验证的结局数据。专家病理学家对138个代表性病例进行了专门的系统性标注,生成详细的区域级和细胞级标签,用于训练和验证AI模型。这些数据补充了一个独立的更大数据集,该数据集包含585个病例、超过一百万个手动标注的细胞,用于模型预训练。该模型通过识别关键组织区室、免疫浸润模式以及可能与治疗反应相关的亚视觉形态学特征来表征肿瘤微环境。在这些可解释的图像衍生特征基础上,AI框架整合了配对的PD-L1 IHC评分,以探索AI驱动的多模态预测性生物标志物发现。
结果:完成了跨12个形态学类别的共计106,442个手动单细胞和组织级标注。AI模型对肿瘤相关组织类别实现了高分割准确度(91.9-95.7%)。所提取的基于图像的特征捕捉了肿瘤微环境的空间和形态学特征,包括免疫浸润和肿瘤内在异质性。该框架在识别可支持反应预测的具有生物学相关性的图像特征方面展现出有前景的稳健性能。
结论:MelanomAIX提供了一个可扩展的AI框架,将黑色素瘤的组织病理学形态与临床结局联系起来。该方法为开发可解释的、基于图像的、预测免疫治疗反应的数字生物标志物奠定了基础。未来的工作将在独立且多样化的患者队列上验证该框架,以评估其在预测免疫治疗反应方面的泛化性和临床实用性。本摘要文本在起草和完善过程中借助了OpenAI的GPT-5语言模型的协助。
查看英文原文 English abstract
Background: The MelanomAIX project developed an AI-based framework to identify image-derived digital biomarkers predictive of immunotherapy response in malignant melanoma. Histopathological slides contain rich subvisual information that reflects tumor-immune interactions often missed by conventional assessment. By combining deep learning-based tissue characterization with molecular and clinical data, MelanomAIX leverages routine pathology for biomarker discovery and precision oncology.
Methods: A real-world cohort of 200 melanoma patients was assembled from multiple clinical archives. Each case was curated with digitized H&E and PD-L1 IHC slides, detailed treatment histories, and verified outcome data. Expert pathologists performed specialized, systematic annotations on 138 representative cases, generating detailed region- and cell-level labels to train and validate the AI model. These data complemented an independent larger dataset of 585 cases with over one million manually annotated cells used for model pretraining. The model characterizes the tumor microenvironment by identifying key tissue compartments, immune infiltration patterns, and subvisual morphological features potentially associated with therapeutic response. Building on these explainable image-derived features, the AI framework integrated paired PD-L1 IHC scores to explore AI-driven, multimodal predictive biomarker discovery.
Results: A total of 106,442 manual single-cell and tissue-level annotations across 12 morphological classes were completed. The AI model achieved high segmentation accuracy for tumor-related tissue classes (91.9-95.7%). Extracted image-based features captured spatial and morphological characteristics of the tumor microenvironment, including immune infiltration and tumor-intrinsic heterogeneity. The framework demonstrates promising robust performance in identifying biologically relevant image features that can support response prediction.
Conclusions: MelanomAIX delivers a scalable AI framework connecting histopathologic morphology with clinical outcomes in melanoma. This approach provides a foundation for developing explainable, image-based digital biomarkers predictive of immunotherapy response. Future work will validate the framework on independent and diverse patient cohorts to assess generalizability and clinical utility in predicting immunotherapy response. This abstract text was prepared with assistance from OpenAI's GPT-5 language model for drafting and refinement purposes.
利益披露 Disclosure
T. Koehler,
Mindpeak GmbH Employment, Stock Option.
E. Mylonakis,
Mindpeak GmbH Employment, Stock Option.
R. Wroblewski,
MVZ HPH Institut für Pathologie und Hämatopathologie GmbH Employment.
K. Daifalla,
Mindpeak GmbH Employment.
J. Kovacevic,
MVZ HPH Institut für Pathologie und Hämatopathologie GmbH Employment.
G. Corradini,
MVZ HPH Institut für Pathologie und Hämatopathologie GmbH Employment.
Mindpeak GmbH Independent Contractor.
P. Frey,
Mindpeak GmbH Employment, Stock Option.
M. Tiemann,
MVZ HPH Institut für Pathologie und Hämatopathologie GmbH Other Business Ownership.
Johnson & Johnson ), Travel.
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Mindpeak GmbH Stock.
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K. Tiemann,
Asklepios Campus Hamburg, Semmelweis University Independent Contractor.
MVZ HPH Institut für Pathologie und Hämatopathologie GmbH Other Business Ownership.
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T. Lang,
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