Digital Pathology 2

• 1438 · PDF Generative AI improves breast cancer genomic subtype prediction from histology images Brennan Geti Simon, Clemens L. Weiss, Darren Chan, Lise Mangiante, Nicholas H. Smith, Zhicheng Ma, Cansu Karakas, Christina Curtis
• 1439 1439 Foundation model-derived features from immunohistochemistry correlate with recurrence and stage in Merkel cell carcinoma Roshan Lodha, Kelsey Ouyang, Claire Reynolds, Allison Vidimos, Bryan Carroll
• 1440 · PDF FLEXMIL: A flexible multimodal multiple instance learning framework for clinical and translational research Meijian Guan, Qifeng Zhou, Sneh Lata, David Soong, Mirna Lechpammer, Craig Thalhauser, Han Si
• 1441 · PDF Whole-slide image and clinical feature integration for superior prostate cancer risk stratification Justin Johnson, Kingsley Ebare
• 1442 · PDF Spatial transcriptomics informed tumor purity estimation from histology slides for triple negative breast cancer Minh-Khang Le, Vivek Pujara, I-Chuang Liao, Yuan Yuan, Joseph Lownik, Graeme Murray, Jin Sun Bitar, Luxi Chen, Parisa Najafzadeh, Keeyon Dabirian, David Lin, Fred W Kolling IV, Parth S. Shah, Jonathan Marotti, Xiaoying Liu, Louis J. Vaickus, Keluo Yao, Linda T. Vahdat, Zarif L. Azher, Joshua Levy
• 1443 · PDF AI-assisted quantitative tissue pathology identifies nuclear morphometric features distinguishing OSCC from normal oral epithelium Kelly Y. P. Liu, Paul Gallagher, Calum Macaulay, Catherine FY Poh
• 1444 · PDF Lauren subtype classification in gastric cancer using deep learning on real-world H&E images Akul Singhania, Qiyuan Hu, Riccardo Miotto, Justin Guinney, Radia M. Johnson
• 1445 · PDF Predicting TCGA molecular subtypes of gastric cancer from H&E whole-slide images using a weakly supervised transMIL-attention framework Yesul Jeong, Dewan M. Bappy, Sangjeong Ahn, Sung Hak Lee
• 1446 · PDF Accurate focal plane is crucial for AI assessment of non-monolayer urine cytology specimens for bladder cancer screening and surveillance Brody McNutt, Sam Harvey, Minh-Khang Le, I-Chuang Liao, Keluo Yao, Xiaoying Liu, Camille Ng, Ahmad Kohsar, Daniel Shou, Christopher VandenBussche, Louis J. Vaickus, Joshua Jay Levy
• 1447 · PDF DIANNE: Segmentation-free localization of histology differential attributes Sergii Domanskyi, Jill C. Rubinstein, Todd Sheridan, Adam Thiesen, Javad Noorbakhsh, Juliana Alcoforado Diniz, Ramalakshmi Ramasamy, Dylan S. Baker, Riley Sheldon, Qian Wu, George Kuchel, Paul Robson, Jeffrey H. Chuang
• 1448 · PDF Deep learning integration of molecular and histopathological data for prognostic stratification in non small cell lung cancer Sanddhya Jayabalan, Konstantinos Efthymiadis, Alexia Eliades, Kyriaki Papadopoulou, Abraham Pouliakis, Elena Fountzilas, Sofia Lampaki, Mattheos Bobos, Anna Goussia, Soultana Meditskou, Konstantinos Kyritsis, Helena Linardou, George Pentheroudakis, Dimitrios Bafaloukos, Dimitrios Pectasides, Epaminondas Samantas, Zunamys I. Carrero, George Fountzilas, Jakob N. Kather
• 1449 · PDF Label free virtual HE from 3D holotomography enables reliable nuclear and microanatomical readouts in thick cancer tissues Juyeon Park, Su-Jin Shin, Geon Kim, Dongjoo Kim, Hyungjoo Cho, Daewoong Ahn, Ji Eun Heo, Jean R. Clemenceau, Dongmin Ryu, Isabel Barnfather, Minji Kim, Inyeop Jang, Ji-Youn Sung, Jeong Hwan Park, Sanggeun Oh, Hyun-Seok Min, Sumin Lee, Kwang Suk Lee, Nam Hoon Cho, Tae Hyun Hwang, YongKeun Park
• 1450 · PDF 3D holotomography-enabled virtual multiplexed staining of thick medical kidney tissue for comprehensive renal pathology Siwon Jeong, Juyeon Park, Hyun-Seok Min, Minsun Jung, YongKeun Park
• 1451 · PDF Visualizing the genotype-phenotype link: Predicting drug-induced tissue dynamics with RNA-based diffusion models Vaagn A. Chopuryan, Arman Petrosyants, Gor A. Chobanyan, Dmitrii V. Ivchenkov, Eduardo Shugaev-Mendosa, Alexander Bagaev, Viktor Svekolkin, Aleksandr Sarachakov
• 1452 · PDF A high-throughput slide scanning pipeline for digitizing and standardizing legacy genitourinary cancer slides Faria Kabir, Mitra Shavakhi, Akash Parvatikar, Adrien Cesaire, Egypt Phillips, Rachel Trowbridge, Liliana Ascione, Pablo Barrios, Marc Eid, Jasmine Lee, Sabina Signoretti, Eliezer Van Allen, Atish Choudhury, Linh Hoang, Toni K. Choueiri, Jeremiah Wala
• 1453 · PDF Association of interpretable histomorphic features with molecular markers: A Computational Histology Artificial Intelligence (CHAI) biomarker development platform analysis Asit Tarsode, Haochen Zhang, Viswesh Krishna, Vrishab Krishna, Snehal S. Sonawane, Lesli A. Kiedrowski, Trevor J. Royce, Anirudh Joshi, Richard M. Goldberg, Eric A. Collisson
• 1454 · PDF Development of an AI framework for identifying image based digital biomarkers predictive of immunotherapy response in malignant melanoma Theresa Koehler, Eleftherios Mylonakis, Raluca Wroblewski, Khalid Daifalla, Jasna Kovacevic, Gianluca Corradini, Patrick Frey, Markus Tiemann, Katharina Tiemann, Tobias Lang
• 1455 · PDF Comparison of digital and artificial intelligence (AI)-computational algorithms for quantifying low/ultralow human epidermal growth factor receptor 2 (HER2) protein expression in metastatic breast cancer (mBC) from clinical samples Savitri Krishnamurthy, Dhanrajan Tiruchinapalli, Clara lam, Simon M. Collin, Rosemary Taylor, Linlin Luo, Anupriya Dutta, Ehab A. Elgabry, Michele S. Woo, Grace E. Kwon, Robert Egger, Jennifer A. Hipp, Lauren Brunner, Jeppe S. Thagaard, Thomas W. Ramsing, Henrik Høeg, Wonkyung Jung, Heon Song, Chang Ho Ahn, Vladimir Kravtsov, Patrick Frey, Ralf Banisch, Stella Redpath
• 1456 · PDF Paletrra TM AI: Automated phenotyping of multiplex immunofluorescence datasets via information maximizing self-training Kevin Gallagher, Jiong Fei, Judy Kuo, Maryam Rohafza, Mitchell P. Levesque, Julia M. Martínez-Gómez, Marianne Thio, Erinn A. Parnell, Qingyan Au, Harry Nunns
• 1457 · PDF Prediction of gene expression and molecular pathway activity from H&E whole slide images in non-small cell lung cancer Mina Khoshdeli, Muhammad Sohaib, Mohammed Qutaish, Mahesh Bachu, Matthew Loya, Prianka Chohan, Omar Jabado, Craig Thalhauser, Mirna Lechpammer, David Soong
• 1458 · PDF Deep learning of H&E slides adds prognostic value beyond IASLC grading in non-mucinous lung adenocarcinoma among never-smokers Monjoy Saha, Thi-Van-Trinh Tran, Huu Phuc Hoang, Praphulla MS Bhawsar, Robert Homer, Marina K. Baine, Lynette M. Sholl, Philippe Joubert, Charles Leduc, William D. Travis, Ruth M. Pfeiffer, Jonas S. Almeida, Soo-Ryum Yang, Maria Teresa Landi

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