PO.CL01.04 · 临床研究
整合多组学与功能研究以鉴定不同AML亚型中AOH1996敏感性的生物标志物
Integrative multiomics and functional studies to identify biomarkers of AOH1996 sensitivity across AML subtypes
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
急性髓系白血病(AML)涵盖多种由不同转录及遗传程序驱动的分子亚型,这些程序影响治疗反应。AOH1996是一种PCNA依赖性复制应激通路抑制剂,已在AML中展现出临床前活性。然而,能够预测异质性AML亚组间敏感性的生物标志物仍未明确。我们首先应用整合多组学分析,以开始界定AOH1996可能最有效的分子背景。将来自PRISM、DepMap及其他经整理的亚型注释的转录组、基因组和蛋白质组数据集与AOH1996反应指标(亦称AUC)进行整合。初步分析聚焦于采用基于象限的可视化框架,对MYC RNA表达相对于AOH1996敏感性进行定量评估;正在进行的多组学分析纳入了突变背景。通路活性评分及蛋白质水平特征正被用于探索AML模型间更广泛的生物标志物模式。在这些计算发现的指导下,我们正在一组经分子注释的AML模型中开展互补的体外研究,以功能性地探究AOH1996反应,计划的读出指标大体聚焦于细胞生长、细胞周期行为,以及与复制应激和固有免疫通路激活相一致的应激相关表型。初步计算结果揭示了MYC表达与AOH1996反应之间关系存在亚型依赖性差异,这与MYC在驱动转录负荷和复制应激中已确立的作用相吻合,并提示MYC表达是一个生物学上合理的候选生物标志物。总之,这一整合多组学及新兴实验框架支持了跨AML亚型开展生物标志物指导下AOH1996评估的可行性,并为未来旨在分子知情治疗分层的转化研究奠定了基础。
查看英文原文 English abstract
Acute myeloid leukemia or AML encompasses diverse molecular subtypes driven by distinct transcriptional and genetic programs that influence therapeutic response. AOH1996 which is a PCNA-dependent replication stress pathway inhibitor has demonstrated preclinical activity in AML. However biomarkers that may predict sensitivity across heterogeneous AML subgroups remain undefined. We first applied integrative multiomic analysis to begin defining the molecular contexts in which AOH1996 may be most effective. Transcriptomic, genomic, and proteomic datasets from PRISM, DepMap, and other curated subtype annotations were integrated with AOH1996 response metrics also known as AUC. Initial analyses focused on quantitative assessment of MYC RNA expression relative to AOH1996 sensitivity using a quadrant based visualization framework, and ongoing multi-omic analyses incorporating mutational backgrounds. Pathway activity scores, and protein level features are being used to explore broader biomarker patterns across AML models. Guided by these computational findings we are developing complementary in vitro studies in a panel of molecularly annotated AML models to functionally probe AOH1996 response, with planned readouts broadly focused on cell growth, cell cycle behavior, and stress associated phenotypes consistent with replication stress and innate immune pathway engagement. Preliminary computational results reveal subtype dependent variation in the relationship between MYC expression and AOH1996 response which aligns with MYC's established role in driving transcriptional load and replication stress and nominating MYC expression as a biologically plausible candidate biomarker. Together, this integrated multiomics and emerging experimental framework supports the feasibility of biomarker-guided evaluation of AOH1996 across AML subtypes and provides a foundation for future translational studies aimed at molecularly informed therapeutic stratification.
利益披露 Disclosure
H. Kala, None..
B. Ball, None..
A. Blackmon, None.