PO.BCS01.05 · 生物信息与计算

Machine learning accelerates discovery of synergistic- PI3K-mTOR combinations for robust tumor growth inhibition in KRAS G12 mutant patient-derived xenografts

编号 5453 展板 20 🕑 4/21 02:00–05:00 📍 Section 1 主讲 Raffaella Pippa, PhD
分会场 Application of Bioinformatics to Cancer Biology 5
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作者与单位 Authors & Affiliations

Emily Eastwood, Yuan-Hung Chien, Jose Lopez-Ramos, Paris Offor, Warren Andrews, Long Hoang Do, Raffaella Pippa

Certis Oncology Solutions, San Diego, CA

摘要 Abstract

Identifying effective drug combinations remains a major challenge in oncology, primarily due to inherent resistance and the limited clinical fidelity of conventional in vitro screening data. To address this translational barrier, we established a robust platform utilizing Certis Oncology's proprietary patient-derived xenograft (PDX) models, which offer high correlation with clinical responses, to predict and validate synergistic therapeutic regimens. Our approach leveraged CertisAI TM , an ensemble of proprietary machine learning (ML) models trained on high-throughput combination experiments. CertisAI TM successfully prioritized combinations targeting the PI3K and mTOR pathways as lead candidates for treating aggressive KRAS G12 mutant tumors, spanning non-small cell lung, gastric, pancreatic, and colorectal cancers. We experimentally evaluated a comprehensive matrix of six PI3K inhibitors and four mTOR inhibitors across distinct KRAS G12 mutant PDX models. These ex-vivo studies rigorously demonstrated that the dual inhibition of the PI3K-mTOR axis resulted in potent, synergistic anti-tumor activity, consistently yielding efficient and sustained tumor cell reduction across all tested models. Notably, a key synergistic combination-involving Everolimus or Tacrolimus (mTORi) paired with Inavolisib (PI3Ki)-translated directly to significant therapeutic benefit in the PDX setting. These findings validate our PDX-informed strategy for rapidly identifying clinically relevant, synergistic combinations. The demonstrated efficacy of the Everolimus/Tacrolimus + Inavolisib combination provides compelling preclinical evidence, establishing this dual-agent approach as a strong therapeutic candidate for clinical evaluation in KRAS G12 mutant solid tumors.
利益披露 Disclosure
E. Eastwood, None.. Y. Chien, None.. J. Lopez-Ramos, None.. P. Offor, None.. W. Andrews, None.. R. Pippa, None.

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