PO.BCS01.05 · 生物信息与计算
多平台生物信息学图谱分析鉴定TTK和NEK2为三阴性乳腺癌中与生存相关的驱动因子
Multiplatform bioinformatic profiling identifies TTK and NEK2 as survival-associated drivers in triple-negative breast cancer
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
引言:三阴性乳腺癌(TNBC)是一种侵袭性亚型,其特征为缺乏ER、PR和HER2受体,限制了靶向治疗选择并导致女性患者预后较差。我们团队此前的证据表明,有丝分裂激酶TTK和NEK2在TNBC中常常过表达,促进中心体扩增和侵袭行为。因此,我们旨在进一步探究这些有丝分裂激酶如何影响生物学过程和TNBC患者的总生存。
假设:诸如TTK和NEK2的有丝分裂激酶在TNBC的EMT和转移过程中发挥关键作用,而其过表达导致TNBC患者的总生存降低。
方法:为从功能上评估该假设,我们使用TCGA和STRING数据库进行了一系列生物信息学分析,以评估与TTK和NEK2表达相关的分子过程。我们还从Kaplan-Meier(KM)Plotter数据库收集信息,以评估TTK和NEK2表达与乳腺癌患者总生存之间的相关性。
结果:来自TCGA的mRNA表达谱显示,TTK和NEK2水平在TNBC各组中显著升高。此外,在KM分析中,这两种有丝分裂激酶的高表达均与总生存降低相关。STRING网络分析揭示了beta-catenin结合、细胞间连接调节和间充质分化的富集,支持这些激酶在EMT相关过程中的作用。
结论:总体而言,这些数据提供了互补的生物信息学证据,表明有丝分裂激酶TTK和NEK2促进TNBC中的EMT激活和侵袭潜能。它们在患者肿瘤中的过表达与不良生存结局相关。因此,这些结果凸显TTK和NEK2作为限制TNBC进展和转移的有前景的分子靶点。
查看英文原文 English abstract
Introduction: Triple-negative breast cancer (TNBC) is an aggressive subtype characterized by the absence of ER, PR, and HER2 receptors, limiting targeted therapeutic options and contributing to poorer outcomes among women. Prior evidence from our group indicates that mitotic kinases TTK and NEK2 are frequently overexpressed in TNBC, promoting centrosome amplification and invasive behaviour. Therefore, we aim to further explore how these mitotic kinases impact biological processes and the overall survival of TNBC patients.
Hypothesis: Mitotic kinases, such as TTK and NEK2, play a pivotal role in EMT and metastatic processes in TNBC, while their overexpression leads to a lower overall survival of TNBC patients.
Method: To functionally assess this hypothesis, we performed a series of bioinformatic analyses using the TCGA and STRING databases to evaluate the molecular processes associated with TTK and NEK2 expression. We also collected information from the Kaplan Meier (KM) Plotter database to evaluate the correlation between TTK and NEK2 expression on BC patients' overall survival.
Results: mRNA expression profiles from TCGA demonstrated significantly elevated TTK and NEK2 levels across TNBC groups. Moreover, high expression of both mitotic kinases correlated with reduced overall survival in KM analyses. STRING network analysis revealed enrichment for beta-catenin binding, cell-to-cell junction regulation, and mesenchymal differentiation, supporting a role for these kinases in EMT-associated processes.
Conclusion: Collectively, these data provide complementary bioinformatic evidence that the mitotic kinases TTK and NEK2 contribute to EMT activation and invasive potential in TNBC. Their overexpression in patient tumors correlates with poor survival outcomes. Thus, these results highlight TTK and NEK2 as promising molecular targets for limiting TNBC progression and metastasis.
利益披露 Disclosure
A. N. Aquino-Acevedo, None..
E. M. Irizarry-Quintana, None..
Á. D. Colón-Burgos, None..
M. Rodríguez-Ruiz, None..
J. A. Orengo-Orengo, None..
E. Rodriguez-Lopez, None..
M. E. Cruz-Robles, None..
H. I. Saavedra, None.