PO.CH01.02 · 化学
DiscoveryDirect:拓展直达生物学范式以加速肿瘤学药物发现
DiscoveryDirect: Extending direct-to-biology paradigms to accelerate oncology drug discovery
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
在肿瘤学药物发现中,从项目启动到交付临床前候选物的平均周期约为四年。为压缩这些时间线,直达生物学策略被越来越多地采用,以加快早期决策和化合物推进。然而,传统方法往往仍局限于对粗反应混合物(CRM)的生物物理解离速率评估,从而限制了其实用性。为克服这些约束,我们通过整合方法拓展了这一范式,包括直达晶体学(D2C),以验证命中物并阐明构效关系(SAR),从而在短至18个月内实现候选前物的交付。
借助我们的Hit Synergy平台(该平台结合了互补的筛选技术),我们针对一个具有挑战性且临床相关的肿瘤学靶点快速生成了新颖、高质量且结构多样的命中物。使用现有HTS液体储备早期部署D2C,交付了配体结合结构,而没有与命中物重新合成或重新获取相关的延迟。这些结构确认了靶点结合并揭示了新的结合相互作用。正交命中物验证采用了直达生物学方法,如解离速率筛选,以及针对纯化样品的定制生化和细胞检测。
结构洞见与生物数据的整合通过高通量化学(HTC)加速了命中物扩展,互补的直达生物学检测对纯化合物和CRM均进行了验证。从产率低至15%的CRM中获得的稳健D2C测定进一步简化了SAR的生成和假设检验,影响了药物化学设计和决策,并压缩了设计-合成-测试循环。生成式AI驱动的想法产生和直达理化性质检测进一步支持了对可开发性的优化。
综上所述,这一完全整合的多模式工作流程在关键项目阶段实现了快速、整体的决策,在显著缩短的时间框架内交付了候选前质量的衍生物。通过在整个流程中嵌入直达发现方法,我们成功加速了从命中物鉴定到候选物选择的进程,以前所未有的效率推动新型疗法走向临床。
查看英文原文 English abstract
The average timeline from project initiation to preclinical candidate delivery in oncology drug discovery is approximately four years. To compress these timelines, direct-to-biology strategies are increasingly employed to expedite early decision-making and compound progression. However, conventional approaches often remain limited to biophysical off-rate assessments of crude reaction mixtures (CRMs), restricting their utility. To overcome these constraints, we have expanded this paradigm through integrated methodologies, including Direct-to-Crystallography (D2C), to validate hits and elucidate structure-activity relationships (SAR), enabling pre-candidate delivery in as little as 18 months.
Harnessing our Hit Synergy platform which combines complementary screening technologies, we rapidly generated novel, high quality and structurally diverse hits for a challenging and clinically relevant oncology target. Early deployment of D2C, using existing HTS liquid stocks, delivered ligand-bound structures without delays associated with hit re-synthesis or re-acquisition. These structures confirmed target engagement and revealed novel binding interactions. Orthogonal hit validation employed direct-to-biology approaches such as off-rate screening, alongside tailored biochemical and cellular assays on purified samples.
Integration of structural insights and biological data accelerated hit expansion via high-throughput chemistry (HTC) and complementary direct-to-biology assays validated for both pure compounds and CRMs. Robust D2C determinations from CRMs yielding as little as 15% product further streamlined SAR generation and hypothesis testing, influencing medicinal chemistry design and decision making and compressing the design-make-test cycle. Generative AI-driven idea generation and direct-to-physicochemical assays further supported optimization for developability.
Together, this fully integrated, multi-modal workflow enabled rapid, holistic decision-making at critical project stages, delivering pre-candidate quality derivatives in a significantly truncated timeframe. By embedding direct-to-discovery methodologies throughout the pipeline, we successfully accelerated progression from hit identification to candidate selection, advancing novel therapeutics toward the clinic with unprecedented efficiency.
利益披露 Disclosure
A. M. Jordan,
Sygnature Discovery Employment.
D. Clare,
Sygnature Discovery Employment.
K. Chohan,
Sygnature Discovery Employment.
R. Davies,
Sygnature Discovery Employment.
J. Finlayson,
Sygnature Discovery Employment.
E. Fordyce,
Sygnature Discovery Employment.
C. Hammond,
Sygnature Discovery Employment.
P. MacFaul,
Sygnature Discovery Employment.
C. Pearce,
Sygnature Discovery Employment.
R. Faba Rodriguez,
Sygnature Discovery Employment.
A. Stowell,
Sygnature Discovery Employment.
M. Thompson,
Sygnature Discovery Employment.
G. Walker,
Sygnature Discovery Employment.
T. Wu,
Sygnature Discovery Employment.