PO.CL01.14 · 临床研究
创新的10x Genomics技术助力临床规模的癌症研究与AI驱动的生物标志物发现
Innovative 10x Genomics technologies enable clinical-scale cancer research and AI-driven biomarker discovery
作者与单位 Authors & Affiliations
摘要 Abstract
中文摘要
背景:
空间组学和单细胞组学正在变革癌症研究,为肿瘤异质性和微环境动态提供了前所未有的分辨率。然而,将这些强大的工具应用于大规模临床研究并进而整合入AI驱动的诊断流程,仍受制于持续存在的挑战,包括高成本、复杂的工作流程、低灵敏度和低特异性,以及有限的可扩展性和通量。解决这些瓶颈对于加速稳健的癌症生物标志物的鉴定与验证至关重要,尤其是在早期检测方面。
方法:
我们引入了多项技术创新,以解决现有空间组学和单细胞技术固有的历史性折衷问题。这些方法旨在以显著降低的成本、并借助精简的高通量工作流程能力,提供卓越的特异性、灵敏度和多重检测能力(plex)。通过对先进化学与计算分析的新颖整合,这些技术能够在临床相关的样本规模上,同时以单细胞分辨率对组织形态学和基因表达特征进行同步分析。
结果:
将这些技术创新应用于临床存档的肿瘤标本,证明了其在临床规模研究中的潜力。我们以前所未有的效率实现了稳健的高重(high-plex)分子分析。至关重要的是,所生成的数据本身具有低噪声、高分辨率和可扩展的特性,使其能够立即适用于机器学习和AI算法。初步分析凸显了其在鉴定可预测治疗反应并支持早期检测的新型生物标志物方面的效用。简化的工作流程大幅缩短了出结果的时间,使该解决方案成为群体规模癌症研究的关键推动力。
结论:
这些技术创新克服了工作流程、成本和灵敏度方面的主要限制,为空间组学和单细胞组学的临床规模部署铺平了道路。通过在大型队列中生成高质量、即用于AI(AI-ready)的数据,该解决方案将加速生物标志物的发现,推动下一代癌症早期检测策略,并全面支持癌症研究中正在进行的AI革命。
查看英文原文 English abstract
Background:
Spatial and single-cell omics are transforming cancer research, offering unprecedented resolution into tumor heterogeneity and microenvironment dynamics. However, the adoption of these powerful tools for large-scale clinical studies and subsequent integration into AI-driven diagnostic pipelines remains hampered by persistent challenges, including high cost, complex workflows, low sensitivity and specificity, and limited scalability and throughput. Addressing these bottlenecks is critical for accelerating the identification and validation of robust cancer biomarkers, especially for early detection.
Methods:
We introduce technology innovations that address the historic compromises inherent in existing spatial and single-cell technologies. These approaches are designed to deliver superior specificity, sensitivity and plex at significantly reduced cost and with streamlined, high-throughput workflow capabilities. Leveraging a novel integration of advanced chemistry and computational analysis, these technologies enable simultaneous, single-cell resolution profiling of both tissue morphology and gene expression signatures across clinically relevant sample scales.
Results:
Application of the technology innovations to clinically archived tumor specimens demonstrates their potential for clinical-scale studies. We achieved robust, high-plex molecular profiling with unprecedented efficiency. Critically, the data generated is inherently low-noise, high-resolution, and scalable, making it immediately amenable to machine learning and AI algorithms. Preliminary analysis highlights its utility in identifying novel biomarkers predictive of therapeutic response and supporting early detection. The simplified workflow dramatically reduces time-to-result, positioning this solution as a key enabler for population-scale cancer research.
Conclusion:
These technology innovations overcome major workflow, cost, and sensitivity limitations, paving the way for the clinical-scale deployment of spatial and single-cell omics. By generating high-quality, AI-ready data across large cohorts, this solution will accelerate biomarker discovery, drive the next generation of early cancer detection strategies, and fully support the ongoing AI revolution in cancer research.
利益披露 Disclosure
H. M. Sasaki,
10x Genomics, Inc. Employment, Stock.
S. H. Mohabbet,
10x Genomics, Inc. Employment, Stock.
I. T. Fiddes,
10x Genomics, Inc. Employment, Stock.
F. Meschi,
10x Genomics, Inc. Employment, Stock.