LBPO.ET01 · 实验与分子治疗 · Late-Breaking

发现可选择性降解激动剂结合型雄激素受体(AR ON)的Helicon多肽在前列腺癌中的应用

Discovery of Helicon peptides that selectively degrade the agonist-bound androgen receptor (AR ON ) in prostate cancer

海报缩略图:发现可选择性降解激动剂结合型雄激素受体(AR ON)的Helicon多肽在前列腺癌中的应用
编号 LB070 展板 23 时间 4/19 02:00–05:00 区域 Section 52 主讲 Diwakar Pattabiraman, PhD
分会场 Late-Breaking Research: Experimental and Molecular Therapeutics 1
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作者与单位 Authors & Affiliations

Diwakar R. Pattabiraman, Brandon Nicolay, Pieter Beerepoot, Kelsey Barrasso, Dorothy Brach, Sascha DeVine, Lee Belding, Paula Ortet, Anthony Quartararo, Archana Iyer, Yelena Arnautova, David Terry, Dakota Hawkins, Shelagh Fluharty, Amelia K. Luciano, Brandon Hriniak, Mousa Jafari, Anandan Palani, Donovan Chin, Markus Haeberlein, Jonathan Hurov

Parabilis Medicines Inc, Cambridge, MA

摘要 Abstract

中文摘要
前列腺癌(PCa)在很大程度上仍由雄激素受体(AR)驱动,即使在去势抵抗性阶段,AR信号也通过多种遗传机制得以维持,包括雄激素结合口袋内的突变以及AR基因座扩增导致野生型蛋白过表达。目前已获批的药物以及处于研发阶段的在研分子,无论是阻断AR信号还是降解AR,都必须结合AR的未配体化构象状态(AR OFF),因为它们结合的是雄激素结合口袋。这种机制的作用是阻止蛋白激活,而非靶向其活性的、激动剂结合的构象——正是后者驱动了转录和肿瘤细胞增殖。在这些药物的选择压力下仍保留AR通路依赖性的持续性肿瘤,往往表现出AR信号的适应性再激活,这与疾病的持续进展相关。 为解决当前AR OFF药物的局限性,我们开发了双功能的螺旋约束型(Helicon)多肽降解剂,可选择性靶向激动剂结合的、具有转录活性的AR构象(AR ON)。通过结合计算从头设计与用于细胞穿透的机器学习模型,我们发现了结合AF2共激活因子位点的化合物,该位点不同于AR OFF药物所靶向的雄激素结合口袋。随后,这些Helicon变构AR ON结合剂通过三元复合物建模与药物化学相结合,被改造为E3特异性、蛋白酶体介导的降解剂,其表现出高亲和力结合、强效的三元复合物形成以及对AR的选择性降解。在AR突变型和AR扩增型前列腺癌细胞系中,AR ON降解可产生强效的抗增殖作用,并伴随对KLK3和TMPRSS2等转录靶标的抑制。值得注意的是,与标准治疗的AR通路抑制剂或在研的AR OFF降解剂联合治疗可进一步增强抗增殖作用,支持通过靶向不同AR池而产生潜在互补的作用机制。 在小鼠中皮下给予Helicon变构AR ON降解剂具有良好的耐受性,并提供持续的全身暴露。治疗在完整的VCaP(AR扩增型)异种移植模型中产生强效的剂量依赖性、持久且靶向的肿瘤生长抑制(TGI),并观察到总AR蛋白水平和核定位的降低。相比之下,采用当前标准治疗的AR通路抑制剂(如恩扎卢胺)治疗在该模型中表现出较差的肿瘤生长抑制。我们的AR ON降解剂所观察到的TGI还伴随血清PSA水平的降低和AR mRNA水平的升高,这与通过负反馈环路解除AR抑制相一致,而这是该模型的已知特征。 总之,这些数据确立了对激动剂结合型AR ON池的选择性降解作为一种首创(first-in-class)治疗策略,有潜力克服现有AR靶向疗法在突变和扩增相关方面的局限性,并在包括去势抵抗性疾病在内的各种雄激素状态下,实现对AR驱动型前列腺癌的持久抑制。
查看英文原文 English abstract
Prostate cancer (PCa) remains largely driven by the androgen receptor (AR) even in castration-resistant settings where AR signaling is maintained through various genetic mechanisms including mutations in the androgen binding pocket and amplifications in the AR locus leading to overexpression of the wild-type protein. Currently approved medicines and investigational molecules in development that block AR signaling or degrade AR necessarily bind to the unliganded conformational state of AR (AR OFF ) as they bind the androgen binding pocket. This mechanism serves to prevent activation of the protein, rather than targeting it in its active, agonist-bound conformation, which is responsible for driving transcription and tumor cell proliferation. Persistent tumors that retain AR pathway dependence under selective pressure from these agents frequently exhibit adaptive reactivation of AR signaling, which is associated with continued disease progression. To address the limitations of current AR OFF agents, we developed bifunctional helically-constrained (Helicon) peptide degraders that selectively target the agonist-bound, transcriptionally active conformation of AR (AR ON ). Using a combination of computational de novo design and machine learning models for cell penetration, we discovered compounds that bind the AF2 coactivator site, a site distinct from the androgen binding pocket targeted by AR OFF agents. These Helicon Allosteric AR ON binders were subsequently engineered using ternary complex modeling in concert with medicinal chemistry as E3-specific, proteasome-mediated degraders that exhibit high-affinity binding, potent ternary complex formation and selective degradation of AR. AR ON degradation in AR-mutant and AR-amplified prostate cancer cell lines leads to potent anti-proliferative effects along with suppression of transcriptional targets such as KLK3 and TMPRSS2 . Notably, combination treatment with standard-of-care AR pathway inhibitors or AR OFF degraders in development further improved anti-proliferative effects, supporting a potentially complementary mechanism of action by targeting different pools of AR. Subcutaneous administration of Helicon Allosteric AR ON degraders in mice is well tolerated and provides sustained systemic exposure. Treatment leads to potent dose-dependent, durable, and on-target tumor growth inhibition (TGI) in the intact VCaP (AR-amplified) xenograft model with an observed reduction in total AR protein levels and nuclear localization. In contrast, treatment with an AR pathway inhibitor that is current standard-of-care such as enzalutamide exhibits poor tumor growth inhibition in this model. TGI observed with our AR ON degraders is also accompanied by a reduction in serum PSA levels and an increase in AR mRNA levels, consistent with relief of AR repression via a negative-feedback loop, a known feature of this model. Together, these data establish selective degradation of the agonist-bound AR ON pool as a first-in-class therapeutic strategy with the potential to overcome both mutational and amplification-related limitations of existing AR-directed therapies and deliver durable suppression of AR-driven prostate cancer across androgen states, including castration-resistant disease.
利益披露 Disclosure
D. R. Pattabiraman, Parabilis Medicines Inc. Employment. B. Nicolay, Parabilis Medicines Inc. Employment. P. Beerepoot, Parabilis Medicines Inc. Employment. K. Barrasso, Parabilis Medicines Inc. Employment. D. Brach, Parabilis Medicines Inc. Employment. S. DeVine, Parabilis Medicines Inc. Employment. L. Belding, Parabilis Medicines Inc. Employment. P. Ortet, Parabilis Medicines Inc. Employment. A. Quartararo, Parabilis Medicines Inc. Employment. A. Iyer, Parabilis Medicines Inc. Employment. Y. Arnautova, Parabilis Medicines Inc. Employment. D. Terry, Parabilis Medicines Inc. Employment. D. Hawkins, Parabilis Medicines Inc. Employment. S. Fluharty, Parabilis Medicines Inc. Employment. A. K. Luciano, Parabilis Medicines Inc. Employment. B. Hriniak, Parabilis Medicines Inc. Employment. M. Jafari, Parabilis Medicines Inc. Employment. A. Palani, Parabilis Medicines Inc. Employment. D. Chin, Parabilis Medicines Inc. Employment. M. Haeberlein, Parabilis Medicines Inc. Employment. J. Hurov, Parabilis Medicines Inc. Employment.

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