PO.CH02.01 · 化学

印楝(Azadirachta indica)叶片的蛋白质组学分析

Proteomic profiling of Neem (Azadirachta indica) leaves

海报缩略图:印楝(Azadirachta indica)叶片的蛋白质组学分析
编号 7703 展板 27 时间 4/22 09:00–12:00 区域 Section 39 主讲 Abigail Kahsay, BS
分会场 Proteomics: Biomarker Discovery and Signaling Networks
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作者与单位 Authors & Affiliations

Abigail Kahsay, Basir Syed, Dorna Davani, Aftab Ahmed

Pharmaceutical science, Chapman University, Irvine, CA

摘要 Abstract

中文摘要
现代科学研究在很大程度上为印楝(Azadirachta indica)树在疾病管理中整体化的传统应用创建了充分验证的研究数据。印楝令人惊叹的历史与现代相关性揭示了更多证据,说明了为何印楝成为我们研究的对象。有价值的研究表明,印楝树的各个部分都是超过130种生物活性化合物的显著天然来源,这些化合物在许多治疗应用中发挥重要作用。从历史上看,印楝作为补充与传统医学(阿育吠陀医学和尤纳尼医学)的来源已被使用超过4500年。这种神奇的印楝树起源于南亚国家。本研究聚焦于印楝叶片的蛋白质组学分析,并检测其对乳腺癌细胞的抗癌潜力。近期的癌症研究将乳腺癌列为女性中增长最快的癌症类型之一。尽管疗法不断进步,乳腺癌仍然是一个令人担忧的健康问题,是女性中的一种致命疾病。许多现有和新兴的癌症疗法存在诸多弊端,这加剧了从植物来源中寻找更安全、更有效的更佳疗法的渴求。由于印楝含有包括蛋白质在内的多种生物活性化合物,其已展现出显著的抗癌潜力。有关印楝中所含蛋白质的研究在很大程度上仍未被探索。UniprotKB中经过审阅的SwissProt数据库仅报道了来自印楝树的三种蛋白。因此,本研究在探索印楝叶片的全局蛋白质组学分析方面具有巨大潜力。进一步的分析还评估了印楝叶片蛋白对MDA-MB-231乳腺癌细胞系的细胞毒性潜力。将脱脂印楝叶片先用正己烷提取,随后用20 mM Tris/HCl缓冲液(pH 8)提取,然后用80%硫酸铵沉淀。粗提取物使用3.5MWCO透析管在水中透析,然后冻干。采用MTS法评估不同浓度印楝叶片粗蛋白对MDA-MB-231细胞的抗癌活性,其中细胞孵育24小时,随后用粗蛋白处理48小时,并在490 nm处测量吸光度。浓度范围(6.4–0.2 mg/mL)对MDA-MB-231细胞显示出抑制作用。此外,下游蛋白质组学分析先通过在Hiload Superdex-200柱上进行凝胶过滤色谱纯化粗提取物来实现。使用10% Tris/甘氨酸凝胶进行SDS-PAGE电泳获得电泳图谱,确认了分子量范围为10至37 kDa的蛋白的存在。通过Q-tof LC-MS/MS进行肽质量指纹图谱分析建立蛋白质组图谱。使用PEAKS Studio X和UniProtKB TrEMBL绿色植物(Viridiplantae)数据库进行的生物信息学分析,在FDR ≤ 1%且至少两个独特肽段匹配的条件下,揭示了归入11个组的17种蛋白。
查看英文原文 English abstract
Modern scientific studies have contributed largely to creating well -validated research data for the holistically rooted use of the Neem (Azadirachta Indica) tree in disease management. Neem's astonishing historical and modern relevance reveal more evidence as to why Neem is the target of our study.Valuable studies have shown that the whole parts of the Neem tree are are markable natural source of more than 130 bioactive compounds, which are highly responsible for many therapeutic applications. Historically, Neem has been used as a source of complementary and traditional medicine Ayurvedic and Unani medicine for over 4,500 years. The mystical tree Neem originated from southern Asian countries. This research focuses on the proteomic profiling of Neem leaves and tests their anticancer potential on breast cancer cells. Recent Cancer studies have ranked breast cancer among the most rapidly increasing cancer types in women. Despite consistent advancements in therapies, breast cancer remains a concerning health issue and a deadly disease among women. Many of the existing and emerging Cancer therapies come with numerous drawbacks, increasing the thirst to find better the rapeutics from plant sources with safer and efficacious outcomes. Neem has shown a remarkable potential against cancer due to its wide range of biologically active compounds, including proteins. Studies on the proteins present in Neem remain largely unexplored. The reviewed SwissProt database in UniprotKB shows only three proteins reported from the Neem tree.Therefore, this study has great potential to explore the global proteomic profiling of Neem leaves. Further analysis has also evaluated the cytotoxic potential of proteins from Neem leaves against MDA-MB 231 breast cancer cell lines. The defatted Neem leaves were extracted in n -hexane, followed by extraction in a 20 mM Tris/HCl buffer, pH 8, and then precipitated using 80% ammonium sulfate. The crude extract was dialyzed in water using a 3.5MWCO dialysis tubing and then lyophilized. The anticancer assay of Neem leaves Crude protein at different concentrations was evaluated against MDA-MB-231 cells by using MTS assay, where cells were incubated for 24hours, followed by the treatment with Crude protein for 48 hours, and absorbance was measured at 490 nm. Concentration ranges (6.4- 0.2 mg/mL) showed inhibitory effects on MDA - MB 231 cells. Further, the downstream proteomics was achieved by purification of Crude using gel filtration chromatography first on Hiload Superdex-200 column. The electrophoretic profile was developed by SDS-PAGE electrophoresis using a 10% Tris/Glycine gel, confirmed the presence of proteins with MW ranging from 10 to 37 kDa. The Proteomic profiles were established by peptide mass fingerprinting using Q-tof LC-MS/MS. The bioinformatic analysis using PEAKS Studio X and the UniProtKB TrEMBL Viridiplantae database revealed 17 proteins in 11 groups at an FDR ≤ 1% with a minimum of two unique peptide matches.
利益披露 Disclosure
A. Kahsay, None.. B. Syed, None.. D. Davani, None.. A. Ahmed, None.

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