PO.BCS01.04 · 生物信息与计算
Application of Bioinformatics to Cancer Biology 4
- 4121 4121 利用SCRIBE(生存切点报告与整合性生物标志物评估)在分子癌症生物标志物的发现与评估中纳入切点稳健性 Incorporation of cut-point robustness in the discovery and evaluation of molecular cancer biomarkers using SCRIBE (Survival Cut-point Reporting and Integrative Biomarker Evaluation) Miguel Lopez de Rodas Gregorio, Barani Kumar Rajendran, Javier Ramos Paradas, Carlos E. de Andrea, David L. Rimm, Hongyu Zhao, Kurt Alex Schalper
-
4122 · PDF 通过多组学识别胰腺导管腺癌中的分子特征 Identification of molecular signatures in pancreatic ductal adenocarcinoma through multiomics Benjamin Miao, Tung-Shing Mamie Lih, Yingwei Hu, Hui Zhang
- 4123 4123 通过转录谱解析mNSCLC的基线肿瘤微环境,识别可预测免疫治疗应答的肿瘤微环境条件 Dissecting the baseline tumor microenvironment in mNSCLC by transcriptional profiling identifies tumor microenvironmental conditions predictive for immunotherapy response Lilian van Vlerken-Ysla, Arash Nabbi, Zhou Zhu, Ross Stewart
-
4124 · PDF 癌症干细胞及其定位:它们的轨迹及在癌症演化中的意义 Cancer stem cells and where to find them: Their trajectories and implications in cancer evolution Zixuan Lan, Philip Awadalla
- 4125 4125 杯状细胞阑尾腺癌在分子层面上区别于其他组织学亚型:来自大规模基因组、转录组和类器官建模的见解 Goblet cell appendiceal adenocarcinoma is molecularly distinct from other histologic subtypes: Insights from large-scale genomic, transcriptomic, and organoid modeling Saikat Chowdhury, Ichiaki Ito, Samuel Rivero-Hinojosa, Chia-Mei Young, Eleanor A. Fallon, Beth A. Helmink, Taylor Neilson, Vasily Aushev, Sacha El Khoury, Abdelrahman MG Yousef, Mahmoud Mohamad Gamal Yousef, Shruti Sharma, Robert Lentz, Adham Jurdi, Paul F. Mansfield, Keith Fournier, Yuan-Hung Lo, Michael G. White, John Paul Shen
-
4126 · PDF 步骤特异性选择的定量分析揭示结肠癌中驱动突变的有序获得 Quantification of step-specific selection reveals ordered acquisition of driver mutations in colon cancer Kira A. Glasmacher, Jeffrey Peter Townsend
-
4127 · PDF 利用 RRBS 和 EM-seq 从小细胞肺癌循环肿瘤 DNA 甲基化特征推断转录组程序 Inferring transcriptomic programs from circulating tumor DNA methylation signatures in small cell lung cancer using RRBS and EM-seq Yuanxin Xi, Allison Stewart, Lixia Diao, Qi Wang, Li Shen, Runsheng Wang, Alberto Duarte, Alexa Halliday, Kavya Ramkumar, Robert Cardnell, Bingnan Zhang, Carl M. Gay, Lauren A. Byers, Jing Wang
-
4128 · PDF 一种具有 CNS/眼部趋向性的小鼠 T 细胞淋巴瘤中致瘤性、免疫逃逸和多药耐药的蛋白质组学特征 Proteomic signatures of tumorigenicity, immune evasion, and multidrug resistance in a murine T-cell lymphoma with CNS/ocular tropism Ori Braitbard, Jacob Hochman
-
4129 · PDF 空间单细胞转录组分析揭示 TIL/PD-L1 定义的 TNBC 亚型间不同的免疫和基质格局 Spatial single-cell transcriptomic profiling reveals distinct immune and stromal landscapes across TIL/PD-L1-defined TNBC subtypes Kyungsoo Kim, Soong June Bae, Yoonjin Cha, Yoonwon Kook, Ah Yoon Kim, Jee Hung Kim, Sung Gwe Ahn, Joon Jeong
- 4130 4130 胃肠上皮化生的单细胞多组学表征揭示 GC 进展高风险病变的潜在遗传、表观遗传和异构体特征 Single-cell multi-omic characterization of gastric intestinal metaplasia reveals potential genetic, epigenetic and isoform signatures of lesions at high risk for GC progression Dongin Lee, Xiangqi Bai, Sue Grimes, Kyungtae Lee, Yan Wang, Charlotte Wong, Anuja Sathe, Ignacio Wichmann, Youlim Kim, Rithika Meka, Renee Long, Allison Im, Billy Lau, Robert Huang, Hanlee P. Ji
-
4131 · PDF PRMT5 抑制的多组学表征识别出 MTAP 缺失癌症中联合治疗的脆弱性 Multi-omics characterization of PRMT5 inhibition identifies vulnerabilities for combination therapy in MTAP-deleted cancers Eliana Destefanis, Blanka Bordas, Jose C. Martinez, Samar Sayedyahossein, Samuel Moffitt, Enakireru M. Erhumuoghene, Daniel Dominguez, Kathleen M. Mulvaney
- 4132 4132 前列腺癌等位基因特异性表达图谱揭示AR信号通路和耐药通路中反复出现的、分期特异性事件 Landscape of allele-specific expression in prostate cancer reveals recurrent, stage-specific events in AR signaling and resistance pathways Margaret Tsui, Kevin Hu, Hanbing Song, Sarah Hsu, Rebecca Chen, Lorraine Nuniz, Julia Pham, Chih-Hao Chang, Keliana Hui, David Quigley, Jingjing Li, Franklin Huang
-
4133 · PDF 单细胞多组学实现胃癌亚型的分子解析 Single cell multi-omics enables molecular dissection of gastric cancer subtypes Junha Cha, Anuja Sathe, Yan Wang, Susan M. Grimes, Hanlee P. Ji
- 4134 4134 用于改进重叠和重复性体细胞结构变异检测及时序推断的长读长测序与系统发育框架 A long-read sequencing and phylogenetic framework for improved detection and timing of overlapping and repetitive somatic structural variations Anton Goretsky, Yuelin Liu, Ayse Keskus, Tanveer Ahmad, Chi-Ping Day, Erin K. Molloy, Mikhail Kolmogorov
-
4135 · PDF 波多黎各头颈癌患者的部位特异性口腔微生物组模式 Site-specific oral microbiome patterns in Puerto Rican head and neck cancer patients Gabriela N. García Quiñones, Jaleniz Suárez Pérez, Orlando Castro Ortíz, María Sánchez Vázquez, Jonathan Hernández Agosto, Filipa Godoy Vitorino, Magaly Martínez Ferrer
-
4136 · PDF 免疫检查点阻断反应的泛癌转录组特征以及跨TIGER队列的基于机器学习的预测 Pan-cancer transcriptomic signatures of immune checkpoint blockade response and machine learning-based prediction across TIGER cohorts Junqing Zhang, Hongru Shen, Yajing Bi, Xiangchun Li
- 4137 4137 酸性肿瘤微环境通过LPL乳酸化介导的巨噬细胞胆固醇代谢重编程促进结直肠癌肝转移 The acidic tumor microenvironment facilitates colorectal cancer liver metastasis through LPL lactylation-mediated reprogramming of macrophage cholesterol metabolism Yifan Zheng, Zhengyu Wei, Zhengran Zhou, Peishan Hu
- 4138 4138 整合计算与实验分析鉴定1,4-苯二胺经PI3K/AKT-MAPK和JAK/STAT信号通路对肝细胞癌的致癌作用 Integrative computational and experimental analysis identifies carcinogenic effects of 1,4-Phenylenediamine in hepatocellular carcinoma via PI3K/AKT-MAPK and JAK/STAT signaling pathway Liuxian Ban, Ran Ding, ZhiQing Long
-
4139 · PDF 用于通路分析的资源分配解卷积 Resource allocation deconvolution for pathway analysis Junhao Wang, Yifei Wang, Tianshu Michael Bao, Yong Li
-
4140 · PDF 苦荬菜(Launaea cornuta)植物化学成分抗高危型HPV靶点的计算机模拟分析 In silico analysis of Lacunae cornuta phytochemical against high-risk HPV targets Solomon Owumi, Esther M. Pius, Oluwaseun M. Owolabi, Ifeoluwa O. Alabi, Victor O. Eso, Sanusi A. Abdullah, Hikmah A. Abdulganiyu, Jesutosin O. Babalola, Chima Amadi, Chinedum Udekwu, Adegboyega K. Oyelere, E. Oluwabunmi Olapade-Olaopa, Olorunseun O. Ogunwobi
- 4141 4141 减瘤性肾切除术联合免疫检查点抑制剂诱导转移性肾细胞癌全身免疫重塑的多模态单细胞分析 Multimodal single-cell analysis of systemic immune remodeling induced by cytoreductive nephrectomy combined with immune checkpoint inhibitors in metastatic renal cell carcinoma Suebin Park, Byungjin Hwang
-
4142 · PDF 乳腺癌从休眠到苏醒的代谢转变分析 Metabolic transition analysis from dormancy to awakening in breast cancer Javier Villela Castrejon, Herbert Levine, Jason T. George
-
4143 · PDF XPC和VEGFA作为T细胞淋巴瘤风险生物标志物的整合分析:一项病例对照研究 Integrative analysis of XPC and VEGFA as risk biomarkers in T-cell lymphoma: A case-control study Faten Awwad, Lama M. Bani Salameh, Laith N. AL-Eitan, Nour Abdo, Sohaib Al-Khatib
-
4144 · PDF 结直肠癌免疫治疗反应预测因子:一种多组学方法 Immunotherapy response predictors in colorectal cancer: A multi-omics approach Joaquin Pedro Merlo, Marco Adrian Scheidegger, Ada G. Blidner, Alejandro Cagnoni, Gabriel A. Rabinovich, Karina Mariño
-
4145 · PDF 全基因组代谢建模鉴定癌前LUSC演化的关键修饰因子 Genome-wide metabolic modeling identifies key modifiers of precancerous LUSC evolution Neel Sanghvi, Thomas Cantore, Chi-Ping Day, Sanna Madan, Nishanth Ulhas Nair, Eytan Ruppin
-
4146 · PDF 黑色素细胞转录状态是转移性黑色素瘤生存的独立标志物 Melanocytic transcriptional state is an independent marker of survival in metastatic melanoma Ziyin Huang, Kristen E. Rhodin, Rami Al-Rohil, Viviana Geron, Arul M. Chinnaiyan, Margaret H. O'Connor, Christina Vadala Angeles, Smita K. Nair, Georgia M. Beasley, Matthew K. Iyer
-
4147 · PDF CEDAR:一个精选的癌症表位和受体综合数据库 CEDAR: A comprehensive database of curated cancer epitopes and receptors Zeynep Kosaloglu-Yalcin, Ibel Carri, Nina Blazeska, Randi Vita, Daniel Marrama, Hannah K. Carter, Morten Nielsen, Alessandro Sette, Bjoern Peters